Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq136 109 1e-18 seq139 91.5 4e-13 seq10 91.5 4e-13 >seq136 Length=130718 Score = 109 bits (120), Expect = 1e-18 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||| ||||| || || || |||| ||||| || | | || Sbjct 71521 ACGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 71580 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| | || || |||||||| || || || Sbjct 71581 ACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 71640 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 71641 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAG 71700 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 71701 GGTGATGGTCTTTCCAGT 71718 Score = 107 bits (118), Expect = 5e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | || || ||||| ||||| || || || |||| ||||| || | | || Sbjct 72460 CGAAGACGGAGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTG 72519 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || |||||||| | || || |||||||| || || || Sbjct 72520 CGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCC 72579 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 72580 TCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCAACCTCGAGG 72639 Query 225673 GTGATCGTCTTGCCCGT 225689 ||||| |||||||| || Sbjct 72640 GTGATGGTCTTGCCAGT 72656 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||||| ||||| ||||| || || || |||| ||||| || | | || Sbjct 71834 ACGAAGACGAAGGACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 71893 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| | || || |||||||| || || || Sbjct 71894 ACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 71953 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| || || ||||||||||| || | || || || | Sbjct 71954 CTCCTTGTCCTGGATCTTGGCTTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAG 72013 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 72014 GGTGATGGTCTTTCCAGT 72031 Score = 105 bits (116), Expect = 2e-17 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || |||||||| || || || || |||| ||||| || | | || Sbjct 72144 ACGAAGACGGAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 72203 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| || |||||||| | || || |||||||| || || || Sbjct 72204 GCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCC 72263 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||| |||||||| ||| || ||||||||||| || | || || || | Sbjct 72264 CTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAG 72323 Query 225672 CGTGATCGTCTTGCCCGT 225689 ||||| ||||| || || Sbjct 72324 GGTGATGGTCTTTCCAGT 72341 Score = 100 bits (110), Expect = 7e-16 Identities = 135/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| ||||| || || || |||| ||||| || | | || | || || Sbjct 71220 AGAACGAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 71279 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| | || || |||||||| || || || |||||||| Sbjct 71280 TCGAGCTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCGGGAGGGATTCCCTCCTTGTCC 71339 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| || ||||||||||| || | || || || | ||||| ||| Sbjct 71340 TGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCGACCTCGAGGGTGATGGTC 71399 Query 225682 TTGCCCGT 225689 || || || Sbjct 71400 TTTCCGGT 71407 >seq139 Length=125316 Score = 91.5 bits (100), Expect = 4e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || |||||||| ||||| || || || |||| ||||| || | | || Sbjct 15359 ACGAAGACGGAGCACAAGGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGT 15418 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | || || || |||||||| ||||||||||| || || || || || || || || || Sbjct 15419 GCGGCCGTCCTCGAGCTGCTTTCCAGCGAAGATGAGACGCTGCTGATCAGGGGGGATTCC 15478 Query 225612 TTCCTTGTCTTGGATCTT 225629 |||||||| |||||||| Sbjct 15479 CTCCTTGTCCTGGATCTT 15496 >seq10 Length=56356 Score = 91.5 bits (100), Expect = 4e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| || || || || || |||| ||||| || | | || | || || Sbjct 7753 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 7694 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || ||||| ||||| || || || || |||||||| Sbjct 7693 TCGAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGGTCAGGGGGGATTCCCTCCTTGTCC 7634 Query 225622 TGGATCTT 225629 |||||||| Sbjct 7633 TGGATCTT 7626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192528495562838