Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F002105055.1_202017 -04-20] 177 sequences; 26,329,764 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq136 150 4e-31 seq10 104 6e-17 >seq136 Length=130718 Score = 150 bits (166), Expect = 4e-31 Identities = 146/188 (78%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| ||||| || |||||||||||||| || || ||||||||||| ||||||||| Sbjct 72034 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACGTCAAA 71975 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || ||||||||||| |||||||| || | ||||||||||| Sbjct 71974 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71915 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| | || || ||| |||| || || || || || Sbjct 71914 AAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71855 Query 178122 CATCTTGT 178129 || || || Sbjct 71854 CACCTCGT 71847 Score = 145 bits (160), Expect = 2e-29 Identities = 145/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| ||||| || |||||||||||||| || || ||||||||||| |||||||| Sbjct 71721 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAG 71662 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || ||||||||||| |||||||| || | ||||||||||| Sbjct 71661 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71602 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || ||| | || || ||| |||| || || || || || Sbjct 71601 AAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71542 Query 178122 CATCTTGT 178129 || || || Sbjct 71541 CACCTCGT 71534 Score = 143 bits (158), Expect = 6e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| ||||| || |||||||||||||| || || ||||||||||| |||||||| Sbjct 71410 CTCACCGGAAAGACCATCACCCTCGAGGTCGAGTCTTCCGACACCATCGACAACGTCAAG 71351 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || ||||||||||| |||||||| || | ||||||||||| Sbjct 71350 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 71291 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || || | || || ||| |||| || || || || || Sbjct 71290 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACTCTT 71231 Query 178122 CATCTTGTT 178130 || || ||| Sbjct 71230 CACCTCGTT 71222 Score = 143 bits (158), Expect = 6e-29 Identities = 145/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177942 CTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAA 178001 ||||| ||||| || |||||||||||||| || || ||||||||||| |||||||| Sbjct 72344 CTCACTGGAAAGACCATCACCCTCGAGGTCGAGTCGTCCGACACCATCGACAACGTCAAG 72285 Query 178002 CAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGA 178061 ||||| |||||||| || ||||||||||| |||||||| || | ||||||||||| Sbjct 72284 GCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGC 72225 Query 178062 AAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTG 178121 || |||||||| || || | || || | || || ||| |||| || || || || || Sbjct 72224 AAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTC 72165 Query 178122 CATCTTGTT 178130 || || ||| Sbjct 72164 CACCTCGTT 72156 Score = 140 bits (154), Expect = 8e-28 Identities = 148/195 (76%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 177936 AAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAAC 177995 ||| | ||||| || || || |||||||||||||| || || ||||||||||| ||| Sbjct 72665 AAAGCCCTCACTGGCAAGACCATCACCCTCGAGGTTGAGTCGTCCGACACCATCGACAAC 72606 Query 177996 GTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTC 178055 ||||| ||||| |||||||| || ||||||||||| |||||||| || | |||||| Sbjct 72605 GTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTC 72546 Query 178056 GCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCA 178115 ||||| || |||||||| || || | || || | || || ||| |||| || || || Sbjct 72545 GCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCG 72486 Query 178116 ACACTGCATCTTGTT 178130 || || || || ||| Sbjct 72485 ACTCTTCACCTCGTT 72471 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || ||||||||||| |||||||| || | ||||||||||| || Sbjct 72910 AAGATCCAGGACAAGGAGGGAATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAG 72851 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || || | || || ||| |||| || || || || || || Sbjct 72850 CAGCTCGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCAC 72791 Query 178125 CTTGT 178129 || || Sbjct 72790 CTCGT 72786 >seq10 Length=56356 Score = 104 bits (114), Expect = 6e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || |||||||| || ||||||||||| || ||||||||||| || Sbjct 7626 AAGATCCAGGACAAGGAGGGAATCCCCCCTGACCAGCAACGTCTCATCTTCGCCGGCAAG 7685 Query 178065 CAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 |||||||| || || | || ||| | || || ||| |||| || || || || || || Sbjct 7686 CAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGACCCTTCAC 7745 Query 178125 CTTGT 178129 ||||| Sbjct 7746 CTTGT 7750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203728470163338