Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq973 125 8e-24 >seq973 Length=1292 Score = 125 bits (138), Expect = 8e-24 Identities = 237/345 (69%), Gaps = 4/345 (1%) Strand=Plus/Plus Query 145924 GCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCG--GGGTTCCTCTTGATCTCCC 145981 || |||||||| || | | || | ||||| | || || ||||| |||||||| | Sbjct 357 GCGGGGTTCCACGCAGACAAGATAATCCTCC-GATC-CGTCGGGTTGTGCTTGATCTTCT 414 Query 145982 CTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGT 146041 | || ||| | || ||||||||||| | ||| || |||| | | || |||| Sbjct 415 CGATGCACTCCTTCAGTTGGTCCACGCCTTTGCCCGTATAGTCTGCGTCCGCATCGACGT 474 Query 146042 ACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCC 146101 || | ||||||||||| | ||||||||| || ||||| ||||| || || || | | Sbjct 475 ACTCAGCCCCGAAGTGTCGCCACTGGAAGCCATAGACCGGCCCGAGATCGCCTTCCCGTC 534 Query 146102 TGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGA 146161 ||| || ||| | | |||| ||| | || || || ||| |||||||||| || Sbjct 535 GATGCGAGAGGCCGCGCGAGTCGAGAAAGGCGCGCGAGCCATTGCCGTCCCAGATGCGGA 594 Query 146162 CGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTT 146221 ||||| ||||||||| | ||||| || | || | |||||||||||| ||||| Sbjct 595 CGCCCTGAGCGGAGAGCAAGGTCGAGTCTGTTGCGCCACGGATGAACCAGAGAAGCTCGG 654 Query 146222 CGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 | |||| ||| || ||| || ||| ||||||| ||| |||| Sbjct 655 CCAGGATGCCCTTCAGGAACGTCCGCTTCGTGGTCAACAGTGGGA 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590011235091560