Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_003401.1
Length=133719
Score E
Sequences producing significant alignments: (Bits) Value
seq973 105 6e-18
>seq973
Length=1292
Score = 105 bits (116), Expect = 6e-18
Identities = 235/346 (68%), Gaps = 10/346 (3%)
Strand=Plus/Plus
Query 21165 GCGGGGTTCCACGCGCACATAACGATGCGCCGAT-CGTGGGG--CCGCCTGTTAAT-TAG 21220
|||||||||||||| ||| | || | ||||| ||| ||| || || | | | |
Sbjct 357 GCGGGGTTCCACGCAGACAAGATAATCCTCCGATCCGTCGGGTTGTGCTTGATCTTCTCG 416
Query 21221 ATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCT 21280
|| ||| | | ||| |||||||| || | ||| |||| ||||| || |
Sbjct 417 ATGCACTCCTT----CAGTTGGTCCACGCCTTTGCCCGTATAGTCTGCGTCCGCATCGAC 472
Query 21281 GTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCCCTCGCG 21340
|||||| ||||| || |||| ||||||||| || || |||||||| |||||||| || ||
Sbjct 473 GTACTCAGCCCCGAAGTGTCGCCACTGGAAGCCATAGACCGGCCCGAGATCGCCTTCCCG 532
Query 21341 GCGGTCCCCGAAGCCCTGCGCCGCCAAAAAGGCGCGGGACCCGTGCGCGTCCCAAATTTT 21400
|| | | || ||| ||| | | ||||||||| || || | ||||||| ||
Sbjct 533 TCGATGCGAGAGGCCGCGCGAGTCGAGAAAGGCGCGCGAGCCATTGCCGTCCCAGATGCG 592
Query 21401 TACGCCGCG-GCGCGACAGTTCGGTGGAGTCGGTGGAGCCCCTGATAAACCACAGCAACT 21459
||||| | ||| || || ||| ||||| || | ||| | ||| ||||| || | ||
Sbjct 593 GACGCCCTGAGCG-GAGAGCAAGGTCGAGTCTGTTGCGCCACGGATGAACCAGAGAAGCT 651
Query 21460 CCTCCACGACGCCCCTCCAAAACACCCTTTTGGTGGTTAACAGAGG 21505
| ||| || |||| || ||| || || ||||| ||||| ||
Sbjct 652 CGGCCAGGATGCCCTTCAGGAACGTCCGCTTCGTGGTCAACAGTGG 697
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427729657020720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |