Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq523 242 5e-59
seq522 237 2e-57
>seq523
Length=1154
Score = 242 bits (268), Expect = 5e-59
Identities = 392/562 (70%), Gaps = 14/562 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| |||||| ||||||| || ||||| | ||| ||| | || |||
Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| | |||| ||| | || ||| || | ||||| | || || |||
Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGACAACGAGCGTCACTTCATCTCG 423
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | |||||||| || | ||| || || ||||||||||| || ||| | |||
Sbjct 424 CACGTCCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACGC 483
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||||| ||| || || | || | | ||||| ||||| ||||| || |||||
Sbjct 484 TTCTCGGGTGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGATG 543
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||||| || | ||||| || || |||| |||||| || |||
Sbjct 544 GAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGCG 603
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA----AA 125371
|| || | | ||||| | || ||||| || | || | ||| || ||
Sbjct 604 CAGCGCGAGTTC---CTCTTCGATGCGATCGAGACCATCCCCTG----CGTGAAGCGCAA 656
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
|||| | |||| | | ||||||| | ||||| || |||| || ||| | || ||
Sbjct 657 GGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGT 716
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491
|| ||||||||||| |||||||||||||| ||||| || ||| ||||||| |||||
Sbjct 717 TGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCT 776
Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551
|||||||||||||||||||||||| || || | |||||| | || || || |||||
Sbjct 777 CAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGA 836
Query 125552 GGGCCTACACTGTGACTTTGCC 125573
|||| | ||| |||||||||
Sbjct 837 GGGCATGCACACGGACTTTGCC 858
>seq522
Length=1154
Score = 237 bits (262), Expect = 2e-57
Identities = 391/562 (70%), Gaps = 14/562 (2%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| |||||| ||||||| || ||||| | ||| ||| | || |||
Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138
||||||||| | |||| ||| | || ||| || | ||||| | || || |||
Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGACAACGAGCGTCACTTCATCTCG 423
Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198
||| | | |||||||| || | ||| || || ||||||||||| || ||| | |||
Sbjct 424 CACGTCCTTGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACGC 483
Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258
||||| ||| || || | || | | ||||| ||||| ||||| || |||||
Sbjct 484 TTCTCGGGCGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGATG 543
Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315
|||||| | ||||| || | ||||| || || |||| |||||| || |||
Sbjct 544 GAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGCG 603
Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA----AA 125371
|| || | | ||||| | || ||||| || | || | ||| || ||
Sbjct 604 CAGCGCGAGTTC---CTCTTCGATGCGATCGAGACCATCCCCTG----CGTGAAGCGCAA 656
Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431
|||| | |||| | | ||||||| | ||||| || |||| || ||| | || ||
Sbjct 657 GGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGT 716
Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491
|| ||||||||||| |||||||||||||| ||||| || || ||||||| |||||
Sbjct 717 TGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCT 776
Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551
|||||||||||||||||||||||| || || | |||||| | || || || |||||
Sbjct 777 CAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGA 836
Query 125552 GGGCCTACACTGTGACTTTGCC 125573
|||| | ||| |||||||||
Sbjct 837 GGGCATGCACACGGACTTTGCC 858
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740976859059640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |