Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq523 242 5e-59 seq522 237 2e-57 >seq523 Length=1154 Score = 242 bits (268), Expect = 5e-59 Identities = 392/562 (70%), Gaps = 14/562 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||||| ||||||| || ||||| | ||| ||| | || ||| Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| | |||| ||| | || ||| || | ||||| | || || ||| Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGACAACGAGCGTCACTTCATCTCG 423 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | | |||||||| || | ||| || || ||||||||||| || ||| | ||| Sbjct 424 CACGTCCTCGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACGC 483 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||||| ||| || || | || | | ||||| ||||| ||||| || ||||| Sbjct 484 TTCTCGGGTGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGATG 543 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| |||||| || ||| Sbjct 544 GAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGCG 603 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA----AA 125371 || || | | ||||| | || ||||| || | || | ||| || || Sbjct 604 CAGCGCGAGTTC---CTCTTCGATGCGATCGAGACCATCCCCTG----CGTGAAGCGCAA 656 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| | | ||||||| | ||||| || |||| || ||| | || || Sbjct 657 GGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGT 716 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||||||||| |||||||||||||| ||||| || ||| ||||||| ||||| Sbjct 717 TGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCT 776 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 |||||||||||||||||||||||| || || | |||||| | || || || ||||| Sbjct 777 CAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGA 836 Query 125552 GGGCCTACACTGTGACTTTGCC 125573 |||| | ||| ||||||||| Sbjct 837 GGGCATGCACACGGACTTTGCC 858 >seq522 Length=1154 Score = 237 bits (262), Expect = 2e-57 Identities = 391/562 (70%), Gaps = 14/562 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| |||||| ||||||| || ||||| | ||| ||| | || ||| Sbjct 304 ATATGGCAGATGTACAAGAAGGCTGAGGCCTCGTTCTGGACTGCCGAGGAGATGGACCTG 363 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||| | |||| ||| | || ||| || | ||||| | || || ||| Sbjct 364 TCCAAGGACATCCACGACTGGAGCAACCGCCTGAACGACAACGAGCGTCACTTCATCTCG 423 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 ||| | | |||||||| || | ||| || || ||||||||||| || ||| | ||| Sbjct 424 CACGTCCTTGCCTTCTTCGCTGCCTCGGACGGCATCGTCAACGAGAACCTGCTCGAACGC 483 Query 125199 TTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATT 125258 ||||| ||| || || | || | | ||||| ||||| ||||| || ||||| Sbjct 484 TTCTCGGGCGAGGTGCAGATCGCTGAAGCGCGCTGCTTCTACGGCTTCCAGATTATGATG 543 Query 125259 GAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATCCG--- 125315 |||||| | ||||| || | ||||| || || |||| |||||| || ||| Sbjct 544 GAGAACATCCACTCTGAGACCTACTCGCTCCTCATCGACACATACATTAAGGAGCCGGCG 603 Query 125316 CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAA----AA 125371 || || | | ||||| | || ||||| || | || | ||| || || Sbjct 604 CAGCGCGAGTTC---CTCTTCGATGCGATCGAGACCATCCCCTG----CGTGAAGCGCAA 656 Query 125372 GGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGT 125431 |||| | |||| | | ||||||| | ||||| || |||| || ||| | || || Sbjct 657 GGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGT 716 Query 125432 GGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCT 125491 || ||||||||||| |||||||||||||| ||||| || || ||||||| ||||| Sbjct 717 TGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCT 776 Query 125492 CAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGA 125551 |||||||||||||||||||||||| || || | |||||| | || || || ||||| Sbjct 777 CAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGA 836 Query 125552 GGGCCTACACTGTGACTTTGCC 125573 |||| | ||| ||||||||| Sbjct 837 GGGCATGCACACGGACTTTGCC 858 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740976859059640