Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq230 98.7 2e-15 >seq230 Length=49901 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| || || || | ||||| || || || || || Sbjct 21861 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCC 21802 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||||||||| || || Sbjct 21801 GCAAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 21742 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | || ||||| | || ||||| || || || ||||| || || || || Sbjct 21741 ACGTTGTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 21682 Query 104543 TTTACAAATATCTGCAT 104559 || || || || ||||| Sbjct 21681 TTCACGAAGATTTGCAT 21665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151267266876412