Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4264 134 4e-26 >seq4264 Length=4713 Score = 134 bits (148), Expect = 4e-26 Identities = 347/517 (67%), Gaps = 10/517 (2%) Strand=Plus/Minus Query 363443 TTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATG 363502 ||||||| || ||||| || || | ||||| || || | || ||||| || ||| Sbjct 3365 TTGTTGAGCGACCGCAACACCTGCTCATGCGGGTCGCCGTCGGCATCCACGGCGAGGACA 3306 Query 363503 TTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCT--CGTGTATTCACGCACGCCAC 363560 |||| |||||||| || ||| | || | | || || |||||||||||| | Sbjct 3305 TTGAGCGTGCGATTGAGACGTATCA-CTAC-ATGTCGAACCGCCACTTCACGCACGCCTC 3248 Query 363561 GCCAACAATGTACAATGCTGGAACTCGTAATCCAC-AGATGTCTTCTTGCTTTCTTCTAA 363619 ||| || | | ||| || || || || | || || | | || ||||| || | Sbjct 3247 GCCGACGCTCTTCAACGCCGGCACA-GTGCACAACCAGCTCGCGTCCTGCTTCCTGGTCT 3189 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 ||||||||||| || |||||||| |||| || || || ||||| ||||| | || | Sbjct 3188 GTATGAAGGACGACTCGATCGAGGGCATCTACGAGACGCTCAAGAACTGTGCGATGATCT 3129 Query 363680 CCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTAC 363738 | |||| || ||||| || || | |||||||| ||||||| || | || || Sbjct 3128 CGAAGACGGCGGGCGGCATCGGCCTCAACATCCACAACATTCGTGCGACCGGGTCGT-AC 3070 Query 363739 ATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAA 363797 ||| ||| || | || || ||||| || | || ||||||||||| | || ||| Sbjct 3069 ATTGCCGGTACGAACGGCATG-TCGAACGGTATCGTGCCCATGCTTCGCGCCTTCGACGC 3011 Query 363798 TACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCT 363857 || || | ||||| |||||||| || || || || || || || || || || Sbjct 3010 GACGGCCCGCTACGTTGACCAGGGCGGCAACAAACGACCCGGTGCCTTCGCCATCTACCT 2951 Query 363858 CGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGA 363917 ||||| || ||||| ||||||| || ||||| ||||| || ||| || || || Sbjct 2950 TGAGCCGTGGCACGCCGACGTTTTTGACTTCCTTGACCTCCGTAAGAACCACGGCAAGGA 2891 Query 363918 GGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGG 363954 |||| ||||| || || || |||||||| || ||| Sbjct 2890 AGAATCCCGTGCCCGCGACCTCTTCTATGCGCTGTGG 2854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303205160651198