Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 136 4e-27
seq231 125 7e-24
seq230 120 3e-22
seq522 114 1e-20
seq523 109 5e-19
seq1288 107 2e-18
seq1287 107 2e-18
seq464 82.4 7e-11
>seq1375
Length=30983
Score = 136 bits (150), Expect = 4e-27
Identities = 167/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | || | ||||||||||| ||||||||||||||
Sbjct 15476 GCCACCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGA 15535
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| ||||| ||||| ||||||||||| ||| |||| |||||||||||||| || ||
Sbjct 15536 AAGAGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGG 15595
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || |||||||| ||| ||| ||| | | || | || || | ||||||||
Sbjct 15596 GATACCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGGACTCGAC 15655
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | || | ||| || ||||| || || || ||||| ||||||||
Sbjct 15656 TTCCAACGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 15703
Score = 123 bits (136), Expect = 2e-23
Identities = 164/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || | || | ||| |||||||| ||||||||||| ||
Sbjct 15705 CCGCCGCGGAGACGGAGGACGAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAA 15764
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| |||||| |||||||| || ||| |||| | |||||||||||| ||||||
Sbjct 15765 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 15824
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || || || ||| ||| ||||| | || | ||| ||| | |||||||
Sbjct 15825 ATGCCCTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATAGTGTCGCTCGACTCGACC 15884
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || || || || ||||| |||||||||
Sbjct 15885 TCAAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 15932
Score = 82.4 bits (90), Expect = 7e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| || ||||| | || | ||||||||||| || |||||||| |||
Sbjct 15932 GCCGCCGCGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 15991
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || || ||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 15992 GAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGCGG 16051
Query 131127 GAT 131129
|||
Sbjct 16052 GAT 16054
>seq231
Length=27061
Score = 125 bits (138), Expect = 7e-24
Identities = 165/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||||||||||| ||| || || | || | ||||||||||| || |||||||||||
Sbjct 927 GCCACCGCGCAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGA 868
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| ||||| |||||||| || ||| |||| | |||||||||||| || ||
Sbjct 867 AAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGCGG 808
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| ||| ||||| | || | || || | ||||||||
Sbjct 807 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCCGAGGACTCGAC 748
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| | || | || || || || | || || ||||| |||||||||
Sbjct 747 CTCCAGCGTGATCGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCATG 699
Score = 114 bits (126), Expect = 1e-20
Identities = 144/198 (73%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || || ||||| || | ||||| |||||| |||||||||||
Sbjct 330 GTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCC 271
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | ||||||||||| || ||||| || || ||||| ||| ||| ||||
Sbjct 270 GCAAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTG 211
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || |||| ||||||| |||| ||| | ||| || ||||| || ||
Sbjct 210 ACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 151
Query 131218 TTTACGAAAATCTGCATG 131235
|| ||||| || ||||||
Sbjct 150 TTCACGAAGATTTGCATG 133
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| ||||| || | |||| ||| |||||||| || |||||||| ||
Sbjct 699 GCCGCCGCGCAGGCGCAGGACGAGGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 640
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || ||| |||||| ||||||||||| ||| | || | ||||||||||| |||||
Sbjct 639 GAGCGTACGCCCGTCCTCGAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTCGGGAGG 580
Query 131127 GAT 131129
|||
Sbjct 579 GAT 577
>seq230
Length=49901
Score = 120 bits (132), Expect = 3e-22
Identities = 164/229 (72%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||||| ||| || || | || | ||||||||||| || |||||||| ||
Sbjct 22737 GCCGCCGCGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 22678
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || ||
Sbjct 22677 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGG 22618
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| ||| || ||||| | || | || || | ||||||||
Sbjct 22617 GATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGAC 22558
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|||| || | || || || || | || || ||||| |||||||||
Sbjct 22557 CTCGAGCGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCATG 22509
Score = 109 bits (120), Expect = 5e-19
Identities = 143/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097
||||||||||| || |||||||| || | ||| || |||||| |||||||||||
Sbjct 21861 GTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCC 21802
Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157
|| |||| | ||||||||||| || ||||| || || ||||| || || ||||
Sbjct 21801 GCAAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTG 21742
Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217
| | || | || ||| | ||||||| |||| ||| | ||| || ||||| || ||
Sbjct 21741 ACGTTGTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTC 21682
Query 131218 TTTACGAAAATCTGCATG 131235
|| ||||| || ||||||
Sbjct 21681 TTCACGAAGATTTGCATG 21664
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/123 (76%), Gaps = 0/123 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
||| ||||| | ||||| || | || | |||||||||||| || |||||||| ||
Sbjct 22509 GCCGCCGCGGAGGCGCAGGACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCTGA 22450
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| || ||| |||||| ||||||||||| ||| |||| | ||||||||||| |||||
Sbjct 22449 GAGCGTACGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGAGG 22390
Query 131127 GAT 131129
|||
Sbjct 22389 GAT 22387
Score = 89.7 bits (98), Expect = 5e-13
Identities = 93/122 (76%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || ||||| | || | ||||||||||| || |||||||| ||
Sbjct 22226 CCACCACGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 22167
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| ||||||
Sbjct 22166 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTCGGGAGGG 22107
Query 131128 AT 131129
||
Sbjct 22106 AT 22105
>seq522
Length=1154
Score = 114 bits (126), Expect = 1e-20
Identities = 152/206 (74%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 46108 GACTGGGCGATGAAGTGGATCAACAGC-AGCACCGCGACTTTCGCCGAGCGTATGGTGGC 46166
|| |||||| | | |||||||||| | |||| || | |||| |||||| | || ||
Sbjct 661 GAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGC 719
Query 46167 CTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA 46226
|| || || |||||| |||| || || ||| || ||| ||||||| | ||||
Sbjct 720 GTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTCAA 779
Query 46227 -AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGG 46285
|| | || | ||||||||||||| || || ||||||||| || |||||||||||||
Sbjct 780 GAAGCGCGGAC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGG 838
Query 46286 GCCTGCATACGGACTTTGCGTGTCTC 46311
|| |||| ||||||||||| || |||
Sbjct 839 GCATGCACACGGACTTTGCCTGCCTC 864
>seq523
Length=1154
Score = 109 bits (120), Expect = 5e-19
Identities = 151/206 (73%), Gaps = 4/206 (2%)
Strand=Plus/Plus
Query 46108 GACTGGGCGATGAAGTGGATCAACAGC-AGCACCGCGACTTTCGCCGAGCGTATGGTGGC 46166
|| |||||| | | |||||||||| | |||| || | |||| |||||| | || ||
Sbjct 661 GAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCT-CGTTCGGCGAGCGCCTCGTTGC 719
Query 46167 CTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTTACATCAA 46226
|| || || |||||| |||| || || ||| || || ||||||| | ||||
Sbjct 720 GTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGGCTCAA 779
Query 46227 -AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGG 46285
|| | || | ||||||||||||| || || ||||||||| || |||||||||||||
Sbjct 780 GAAGCGCGGAC-TCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGG 838
Query 46286 GCCTGCATACGGACTTTGCGTGTCTC 46311
|| |||| ||||||||||| || |||
Sbjct 839 GCATGCACACGGACTTTGCCTGCCTC 864
>seq1288
Length=8444
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||| ||||| || | || | |||||||||||||| |||||||| |||||
Sbjct 547 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 488
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 487 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 428
Query 131128 AT 131129
||
Sbjct 427 AT 426
>seq1287
Length=7882
Score = 107 bits (118), Expect = 2e-18
Identities = 97/122 (80%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||||| ||||| || | || | |||||||||||||| |||||||| |||||
Sbjct 548 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 489
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | ||||||||||| || |||
Sbjct 488 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 429
Query 131128 AT 131129
||
Sbjct 428 AT 427
>seq464
Length=19301
Score = 82.4 bits (90), Expect = 7e-11
Identities = 84/110 (76%), Gaps = 0/110 (0%)
Strand=Plus/Plus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| ||||| | || | ||||||||||| || |||||||| ||| | ||||| |
Sbjct 3597 CGGAGCACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCG 3656
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129
||||| ||||||||||| ||| |||| | ||||||||||| || |||||
Sbjct 3657 TCCTCGAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGAT 3706
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471960353477760
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