Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_009333.1
Length=137969
Score E
Sequences producing significant alignments: (Bits) Value
seq973 93.3 4e-14
>seq973
Length=1292
Score = 93.3 bits (102), Expect = 4e-14
Identities = 163/236 (69%), Gaps = 6/236 (3%)
Strand=Plus/Plus
Query 20411 GCCGGGTTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCC 20470
|| |||||||||||| ||| || || || | ||| ||| || | || || | |
Sbjct 357 GCGGGGTTCCACGCAGACAAGATAATCCTCCGATCCGTCGGGTTGTGCTTGAT---CTTC 413
Query 20471 ACAATG---TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACG 20527
| ||| | | || |||||| | || | ||| |||||||| || ||||| || |||
Sbjct 414 TCGATGCACTCCTTCAGTTGGTCCACGCCTTTGCCCGTATAGTCTGCGTCCGCATCGACG 473
Query 20528 TACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTT 20587
||| | ||||| ||||| | ||||||||| || || || || || | ||| || |||| |
Sbjct 474 TACTCAGCCCCGAAGTGTCGCCACTGGAAGCCATAGACCGGCCCGAGATCGCCTTCCCGT 533
Query 20588 CTGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATAT 20643
| |||| ||||||||| | | || || | | |||||||| |||||| ||
Sbjct 534 CGATGCGAGAGGCCGCGCGAGTCGAGAAAGGCGCGCGAGCCATTGCCGTCCCAGAT 589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 441323757964760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |