Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq473 91.5 3e-13 >seq473 Length=15333 Score = 91.5 bits (100), Expect = 3e-13 Identities = 177/259 (68%), Gaps = 2/259 (1%) Strand=Plus/Plus Query 298291 GATTTCTTCGTTCTTCGTGATGCTTGCCACGGATG-CATCGCGGACATTCAATAGTTTTC 298349 ||| |||||||||||| |||| || | || | || | ||||| || || | || || | Sbjct 3124 GATCTCTTCGTTCTTCATGAT-CTGGTCATGCTTGGCCTCGCGAACGTTGAGGAGCTTGC 3182 Query 298350 CACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAA 298409 |||| || |||||||| || | | ||||||||||| ||| || || || || |||| Sbjct 3183 CACGCAGTGGGAACACGCCGAAGTTGTCGCGACCGACGACGCCGAGTCCGGCAATCGCAA 3242 Query 298410 GTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCACATTTTGCTGTTATTCGTTC 298469 | ||| || ||||| ||||| || || ||||| ||||| ||| ||| || | | Sbjct 3243 GCGTCTTGGCCGAATCACCCTCGGTTAGGATGAGCGTGCAGTCTTTCGCGTTCTTGCTCC 3302 Query 298470 CAGCCCATGTAGCATCGTTGAGTTTGGGAATTCCAGTCACTCGGATCTTCTTGGTACCGT 298529 | || | || || |||||||||| || ||| ||| | || || |||| Sbjct 3303 CTGCGTTGTTCGCGTCCGACAGTTTGGGAAGACCGCTCAGACGGGTGCGTTTCGTGCCGT 3362 Query 298530 CGGTCTTCTTCAGCTCTTT 298548 | |||||||| | ||| || Sbjct 3363 CCGTCTTCTTGATCTCCTT 3381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102754392652150