Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_010191.2
Length=186713
Score E
Sequences producing significant alignments: (Bits) Value
seq523 140 4e-28
seq522 134 2e-26
seq473 107 2e-18
>seq523
Length=1154
Score = 140 bits (154), Expect = 4e-28
Identities = 347/521 (67%), Gaps = 7/521 (1%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| | |||||||| || |||||||| || || |||||| || ||
Sbjct 858 GGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 799
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
|||||||| || |||||||| | |||||| || | || || ||||||||||||||
Sbjct 798 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGAT 739
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225
||||| || |||||||||| ||| ||||| | || |||| | || || |
Sbjct 738 GCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGAT 679
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285
|||| | | |||||||| ||||| || | || |||| ||||| |||||| || ||
Sbjct 678 CCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAA 619
Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345
||| || | | || || || ||||| | || ||||| || || || ||
Sbjct 618 GAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTC 559
Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404
||||| | | ||| || ||| | ||||||| |||||||||| ||||
Sbjct 558 AGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCT 500
Query 126405 GTACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463
| |||||| | | | || ||| | | ||||| || || || || || ||||
Sbjct 499 GCACCTCACCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCG 441
Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520
|| || || |||| | | ||||| | | || || ||||||| || | |||||
Sbjct 440 AAGAAGGCGAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAG 381
Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||| | ||||| || || || | |||||| ||||||||
Sbjct 380 TCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340
>seq522
Length=1154
Score = 134 bits (148), Expect = 2e-26
Identities = 346/521 (66%), Gaps = 7/521 (1%)
Strand=Plus/Minus
Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105
|||||| || ||| | |||||||| || |||||||| || || |||||| || ||
Sbjct 858 GGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 799
Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165
|||||||| || |||||||| | |||||| || | || || ||||||||||||||
Sbjct 798 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGAT 739
Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225
||||| || |||||||||| ||| ||||| | || |||| | || || |
Sbjct 738 GCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGAT 679
Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285
|||| | | |||||||| ||||| || | || |||| ||||| |||||| || ||
Sbjct 678 CCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAA 619
Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345
||| || | | || || || ||||| | || ||||| || || || ||
Sbjct 618 GAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTC 559
Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404
||||| | | ||| || ||| | ||||||| |||||||||| ||||
Sbjct 558 AGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCT 500
Query 126405 GTACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463
| ||||| | | | || ||| | | ||||| || || || || || ||||
Sbjct 499 GCACCTCGCCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCG 441
Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520
|| || || |||| | | ||||| | | || || ||||||| || | |||||
Sbjct 440 AAGAAGGCAAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAG 381
Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561
|||| | ||||| || || || | |||||| ||||||||
Sbjct 380 TCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340
>seq473
Length=15333
Score = 107 bits (118), Expect = 2e-18
Identities = 261/380 (69%), Gaps = 24/380 (6%)
Strand=Plus/Plus
Query 172651 ATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACATCTTGA-TACTCCTTA 172708
||||||||| ||||| || ||||||||||| ||||| ||| | | || ||||||||
Sbjct 3031 ATCCGTCATGATCATGAGACGACCATAGCGCAAGCT-GGAGGTGT-TCGAGTACTCCTTG 3088
Query 172709 CCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGA 172763
|| ||||||| ||||||||||| | | || ||||| ||| |||| ||
Sbjct 3089 TTGTGCACGAGACCCATGATCTTCTTGATGTTCTGGATCTCTTCGTTCTTCATGATCTG- 3147
Query 172764 GTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGT 172823
|| || || || ||||| || || ||| ||||| || |||||||| |||
Sbjct 3148 GTCATGCT--TG--GCCTCGCGAACGTTGAGGAGCTTGCCACGCAGTGGGAACACGCCGA 3203
Query 172824 AGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCT 172883
||| || ||||| || || || || |||| || || ||||| || ||||||||||
Sbjct 3204 AGTTGTCGCGACCGACGACGCCGAGTCCGGCAATCGCAAGCGTCTTGGCCGAATCACCCT 3263
Query 172884 CCGTCACGATGAGCGTACA--CTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTC 172941
| || | ||||||||| || ||||| | | ||| |||| || |||||||| ||
Sbjct 3264 CGGTTAGGATGAGCGTGCAGTCTTTCGCGTTCTTGC--TCCCTGCGTTGTTCGCGTCCGA 3321
Query 172942 CAACTTGGGAATACCAGTAATTTTG--GACTTGCGGGCACCATCTGTCTTCTTGAGTTCC 172999
|| ||||||| ||| | | | | || || | || || |||||||||| |||
Sbjct 3322 CAGTTTGGGAAGACCGCTCAGACGGGTGCGTTTCGTG--CCGTCCGTCTTCTTGATCTCC 3379
Query 173000 TTCATC-TCCTTGAACTTGG 173018
|| ||| ||| ||||||||
Sbjct 3380 TT-ATCGGCCTGGAACTTGG 3398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 597287226548120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |