Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq523 140 4e-28 seq522 134 2e-26 seq473 107 2e-18 >seq523 Length=1154 Score = 140 bits (154), Expect = 4e-28 Identities = 347/521 (67%), Gaps = 7/521 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||||| || |||||||| || || |||||| || || Sbjct 858 GGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 799 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| || |||||||| | |||||| || | || || |||||||||||||| Sbjct 798 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGAT 739 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || |||||||||| ||| ||||| | || |||| | || || | Sbjct 738 GCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGAT 679 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 |||| | | |||||||| ||||| || | || |||| ||||| |||||| || || Sbjct 678 CCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAA 619 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 ||| || | | || || || ||||| | || ||||| || || || || Sbjct 618 GAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTC 559 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 ||||| | | ||| || ||| | ||||||| |||||||||| |||| Sbjct 558 AGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCT 500 Query 126405 GTACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | |||||| | | | || ||| | | ||||| || || || || || |||| Sbjct 499 GCACCTCACCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCG 441 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || |||| | | ||||| | | || || ||||||| || | ||||| Sbjct 440 AAGAAGGCGAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAG 381 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| | ||||| || || || | |||||| |||||||| Sbjct 380 TCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340 >seq522 Length=1154 Score = 134 bits (148), Expect = 2e-26 Identities = 346/521 (66%), Gaps = 7/521 (1%) Strand=Plus/Minus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| | |||||||| || |||||||| || || |||||| || || Sbjct 858 GGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCC 799 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| || |||||||| | |||||| || | || || |||||||||||||| Sbjct 798 GGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGAT 739 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAA 126225 ||||| || |||||||||| ||| ||||| | || |||| | || || | Sbjct 738 GCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGAT 679 Query 126226 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 126285 |||| | | |||||||| ||||| || | || |||| ||||| |||||| || || Sbjct 678 CCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAA 619 Query 126286 GAGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTC 126345 ||| || | | || || || ||||| | || ||||| || || || || Sbjct 618 GAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTC 559 Query 126346 GCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCT 126404 ||||| | | ||| || ||| | ||||||| |||||||||| |||| Sbjct 558 AGAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCT 500 Query 126405 GTACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCA 126463 | ||||| | | | || ||| | | ||||| || || || || || |||| Sbjct 499 GCACCTCGCCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCG 441 Query 126464 AAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAG 126520 || || || |||| | | ||||| | | || || ||||||| || | ||||| Sbjct 440 AAGAAGGCAAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAG 381 Query 126521 TCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 |||| | ||||| || || || | |||||| |||||||| Sbjct 380 TCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340 >seq473 Length=15333 Score = 107 bits (118), Expect = 2e-18 Identities = 261/380 (69%), Gaps = 24/380 (6%) Strand=Plus/Plus Query 172651 ATCCGTCATAATCATAAGCCGACCATAGCG-AAGCTCGGAAACATCTTGA-TACTCCTTA 172708 ||||||||| ||||| || ||||||||||| ||||| ||| | | || |||||||| Sbjct 3031 ATCCGTCATGATCATGAGACGACCATAGCGCAAGCT-GGAGGTGT-TCGAGTACTCCTTG 3088 Query 172709 CCCTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGA 172763 || ||||||| ||||||||||| | | || ||||| ||| |||| || Sbjct 3089 TTGTGCACGAGACCCATGATCTTCTTGATGTTCTGGATCTCTTCGTTCTTCATGATCTG- 3147 Query 172764 GTTGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGT 172823 || || || || ||||| || || ||| ||||| || |||||||| ||| Sbjct 3148 GTCATGCT--TG--GCCTCGCGAACGTTGAGGAGCTTGCCACGCAGTGGGAACACGCCGA 3203 Query 172824 AGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCT 172883 ||| || ||||| || || || || |||| || || ||||| || |||||||||| Sbjct 3204 AGTTGTCGCGACCGACGACGCCGAGTCCGGCAATCGCAAGCGTCTTGGCCGAATCACCCT 3263 Query 172884 CCGTCACGATGAGCGTACA--CTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCGTC 172941 | || | ||||||||| || ||||| | | ||| |||| || |||||||| || Sbjct 3264 CGGTTAGGATGAGCGTGCAGTCTTTCGCGTTCTTGC--TCCCTGCGTTGTTCGCGTCCGA 3321 Query 172942 CAACTTGGGAATACCAGTAATTTTG--GACTTGCGGGCACCATCTGTCTTCTTGAGTTCC 172999 || ||||||| ||| | | | | || || | || || |||||||||| ||| Sbjct 3322 CAGTTTGGGAAGACCGCTCAGACGGGTGCGTTTCGTG--CCGTCCGTCTTCTTGATCTCC 3379 Query 173000 TTCATC-TCCTTGAACTTGG 173018 || ||| ||| |||||||| Sbjct 3380 TT-ATCGGCCTGGAACTTGG 3398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597287226548120