Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_013288.1
Length=191761
Score E
Sequences producing significant alignments: (Bits) Value
seq523 132 6e-26
seq522 129 7e-25
seq473 105 8e-18
>seq523
Length=1154
Score = 132 bits (146), Expect = 6e-26
Identities = 345/520 (66%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | |||||||| || |||||||| || || |||||| || ||
Sbjct 857 GCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 798
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
|||||||| || |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 797 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATG 738
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699
||||| || |||||||||| || |||||| | || |||| || | | |
Sbjct 737 CCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGATC 678
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
||| | | |||||||| ||||| || | || |||| ||||| |||||| || |||
Sbjct 677 CACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAAG 618
Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819
|| || | | || || || ||||| | || ||||| || || || ||
Sbjct 617 AGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTCA 558
Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878
||||| | | ||| || ||| | ||||||| |||||||||| |||||
Sbjct 557 GAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCTG 499
Query 127879 TACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937
|||||| | | | || ||| | | ||||| || || || || || |||| |
Sbjct 498 CACCTCACCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCGA 440
Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994
| || || |||| | | ||||| | | || || ||||||| || | ||||||
Sbjct 439 AGAAGGCGAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAGT 380
Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||| || ||||| || || || | |||||| ||||||||
Sbjct 379 CGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340
>seq522
Length=1154
Score = 129 bits (142), Expect = 7e-25
Identities = 344/520 (66%), Gaps = 7/520 (1%)
Strand=Plus/Minus
Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579
||||| || ||| | |||||||| || |||||||| || || |||||| || ||
Sbjct 857 GCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 798
Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639
|||||||| || |||||||| | |||||| || | || ||||| |||||||||||
Sbjct 797 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATG 738
Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699
||||| || |||||||||| || |||||| | || |||| || | | |
Sbjct 737 CCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGATC 678
Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759
||| | | |||||||| ||||| || | || |||| ||||| |||||| || |||
Sbjct 677 CACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAAG 618
Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819
|| || | | || || || ||||| | || ||||| || || || ||
Sbjct 617 AGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTCA 558
Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878
||||| | | ||| || ||| | ||||||| |||||||||| |||||
Sbjct 557 GAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCTG 499
Query 127879 TACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937
||||| | | | || ||| | | ||||| || || || || || |||| |
Sbjct 498 CACCTCGCCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCGA 440
Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994
| || || |||| | | ||||| | | || || ||||||| || | ||||||
Sbjct 439 AGAAGGCAAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAGT 380
Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034
||| || ||||| || || || | |||||| ||||||||
Sbjct 379 CGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340
>seq473
Length=15333
Score = 105 bits (116), Expect = 8e-18
Identities = 263/382 (69%), Gaps = 28/382 (7%)
Strand=Plus/Plus
Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCG-AAGCTCGGAAACATCTTGA-TAATCCTTA 176728
||||||||| |||||||| ||||||||||| ||||| ||| | | || || |||||
Sbjct 3031 ATCCGTCATGATCATGAGACGACCATAGCGCAAGCT-GGAGGTGT-TCGAGTACTCCTTG 3088
Query 176729 CCTTGTTGA--AGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGT 176781
|||| | ||||||| |||||||||| | | || ||||| ||| |||| |
Sbjct 3089 --TTGTGCACGAGACCCATGATCTTCTTGATGTTCTGGATCTCTTCGTTCTTCATGATCT 3146
Query 176782 GAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACC 176841
| || || || || ||||| || || ||| || || || |||||||| ||
Sbjct 3147 G-GTCATGCT--TG--GCCTCGCGAACGTTGAGGAGCTTGCCACGCAGTGGGAACACGCC 3201
Query 176842 GTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACC 176901
| ||| || ||||| || || ||| || |||| || || ||||| || ||||||||
Sbjct 3202 GAAGTTGTCGCGACCGACGACGCCGAGTCCGGCAATCGCAAGCGTCTTGGCCGAATCACC 3261
Query 176902 CTCCGTCACGATGAGCGTACA--CTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCG 176959
||| || | ||||||||| || ||||| | | ||| |||| || |||||||| ||
Sbjct 3262 CTCGGTTAGGATGAGCGTGCAGTCTTTCGCGTTCTTGC--TCCCTGCGTTGTTCGCGTCC 3319
Query 176960 TCCAACTTGGGAATACCAGTAATTTTG--GACTTACGAGCACCATCTGTCTTCTTGAGTT 177017
|| ||||||| ||| | | | | || || | || || |||||||||| |
Sbjct 3320 GACAGTTTGGGAAGACCGCTCAGACGGGTGCGTTTCGTG--CCGTCCGTCTTCTTGATCT 3377
Query 177018 CCTTCATC-TCCTTGAACTTGG 177038
|||| ||| ||| ||||||||
Sbjct 3378 CCTT-ATCGGCCTGGAACTTGG 3398
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 613439031681240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |