Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq523 132 6e-26 seq522 129 7e-25 seq473 105 8e-18 >seq523 Length=1154 Score = 132 bits (146), Expect = 6e-26 Identities = 345/520 (66%), Gaps = 7/520 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| || |||||||| || || |||||| || || Sbjct 857 GCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 798 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 797 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAAGATG 738 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699 ||||| || |||||||||| || |||||| | || |||| || | | | Sbjct 737 CCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGATC 678 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759 ||| | | |||||||| ||||| || | || |||| ||||| |||||| || ||| Sbjct 677 CACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAAG 618 Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819 || || | | || || || ||||| | || ||||| || || || || Sbjct 617 AGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTCA 558 Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878 ||||| | | ||| || ||| | ||||||| |||||||||| ||||| Sbjct 557 GAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCTG 499 Query 127879 TACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937 |||||| | | | || ||| | | ||||| || || || || || |||| | Sbjct 498 CACCTCACCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCGA 440 Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994 | || || |||| | | ||||| | | || || ||||||| || | |||||| Sbjct 439 AGAAGGCGAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAGT 380 Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| || ||||| || || || | |||||| |||||||| Sbjct 379 CGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340 >seq522 Length=1154 Score = 129 bits (142), Expect = 7e-25 Identities = 344/520 (66%), Gaps = 7/520 (1%) Strand=Plus/Minus Query 127520 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCT 127579 ||||| || ||| | |||||||| || |||||||| || || |||||| || || Sbjct 857 GCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAGGCCG 798 Query 127580 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATC 127639 |||||||| || |||||||| | |||||| || | || ||||| ||||||||||| Sbjct 797 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATG 738 Query 127640 CCCTCCACACACGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATCAAAC 127699 ||||| || |||||||||| || |||||| | || |||| || | | | Sbjct 737 CCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGATC 678 Query 127700 CACTTCATCGCCCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAG 127759 ||| | | |||||||| ||||| || | || |||| ||||| |||||| || ||| Sbjct 677 CACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAAG 618 Query 127760 AGTTCCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCG 127819 || || | | || || || ||||| | || ||||| || || || || Sbjct 617 AGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTCA 558 Query 127820 CCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTG 127878 ||||| | | ||| || ||| | ||||||| |||||||||| ||||| Sbjct 557 GAGTGGATGTTCTCCATCAT-AATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCTG 499 Query 127879 TACCTCATCGGCAAAATTGTTATTG-ATATTCTCAAAAACAATTCCATCGGACCCAGCAA 127937 ||||| | | | || ||| | | ||||| || || || || || |||| | Sbjct 498 CACCTCGCCCG-AGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCGA 440 Query 127938 AAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCCAGT 127994 | || || |||| | | ||||| | | || || ||||||| || | |||||| Sbjct 439 AGAAGGCAAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCAGT 380 Query 127995 CGTCGAGATCCTTTGAGAGATCTACCTCCTCCGCAGTCCA 128034 ||| || ||||| || || || | |||||| |||||||| Sbjct 379 CGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCA 340 >seq473 Length=15333 Score = 105 bits (116), Expect = 8e-18 Identities = 263/382 (69%), Gaps = 28/382 (7%) Strand=Plus/Plus Query 176671 ATCCGTCATAATCATGAGCCGACCATAGCG-AAGCTCGGAAACATCTTGA-TAATCCTTA 176728 ||||||||| |||||||| ||||||||||| ||||| ||| | | || || ||||| Sbjct 3031 ATCCGTCATGATCATGAGACGACCATAGCGCAAGCT-GGAGGTGT-TCGAGTACTCCTTG 3088 Query 176729 CCTTGTTGA--AGACCCAAAATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGT 176781 |||| | ||||||| |||||||||| | | || ||||| ||| |||| | Sbjct 3089 --TTGTGCACGAGACCCATGATCTTCTTGATGTTCTGGATCTCTTCGTTCTTCATGATCT 3146 Query 176782 GAGTTGCGCCACTGAAGCGTCGCGGACATTTTTACACTTCCCGCGGAGAGGGAACACACC 176841 | || || || || ||||| || || ||| || || || |||||||| || Sbjct 3147 G-GTCATGCT--TG--GCCTCGCGAACGTTGAGGAGCTTGCCACGCAGTGGGAACACGCC 3201 Query 176842 GTAGTGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACC 176901 | ||| || ||||| || || ||| || |||| || || ||||| || |||||||| Sbjct 3202 GAAGTTGTCGCGACCGACGACGCCGAGTCCGGCAATCGCAAGCGTCTTGGCCGAATCACC 3261 Query 176902 CTCCGTCACGATGAGCGTACA--CTTTCCAGATTGTGCCGTCCCCGCCTTGTTCGCATCG 176959 ||| || | ||||||||| || ||||| | | ||| |||| || |||||||| || Sbjct 3262 CTCGGTTAGGATGAGCGTGCAGTCTTTCGCGTTCTTGC--TCCCTGCGTTGTTCGCGTCC 3319 Query 176960 TCCAACTTGGGAATACCAGTAATTTTG--GACTTACGAGCACCATCTGTCTTCTTGAGTT 177017 || ||||||| ||| | | | | || || | || || |||||||||| | Sbjct 3320 GACAGTTTGGGAAGACCGCTCAGACGGGTGCGTTTCGTG--CCGTCCGTCTTCTTGATCT 3377 Query 177018 CCTTCATC-TCCTTGAACTTGG 177038 |||| ||| ||| |||||||| Sbjct 3378 CCTT-ATCGGCCTGGAACTTGG 3398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613439031681240