Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq522 347 1e-90
seq523 343 1e-89
seq230 141 9e-29
seq1375 118 1e-21
seq231 111 2e-19
seq1288 104 2e-17
seq1287 104 2e-17
seq464 86.0 6e-12
>seq522
Length=1154
Score = 347 bits (384), Expect = 1e-90
Identities = 460/635 (72%), Gaps = 15/635 (2%)
Strand=Plus/Minus
Query 132814 TGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGC 132873
|||||||||| || || ||||||| ||| ||| || || || | || || ||
Sbjct 941 TGCTCGATGGTAACGGCCTCGGTGATGATGGCCCGCACAACGTCCTCGTTGGGGCGACGC 882
Query 132874 ACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933
| || |||| | | ||| |||||||| |||| ||||||||| | || |||
Sbjct 881 TTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATG 822
Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993
|| |||||| ||| || | |||||||||||| ||||| || |||||||| || |||| |
Sbjct 821 AGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAG 762
Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053
||||| |||||| ||||||| |||||||||||| ||||| || || ||||||||||||
Sbjct 761 GCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCG 702
Query 133054 AACGTGGCTTCTTTGCTGGC----GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC 133109
|||| | || |||| | |||||| |||||||| || ||||| || ||
Sbjct 701 AACGAG----CTCTGCTCGTCGTTGATCCACGTGAGCGCCCACTCAGCCTTGCGCTTCAC 646
Query 133110 GCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACG 133167
||| || || || ||||| || | || | | | | | || | || | | |
Sbjct 645 GCAGGGGATGGTCTCGATCGCATCGAAGAG--GAACTCGCGCTGCGCCGGCTCCTTAATG 588
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| |||||||||||| ||| || | || ||||| | ||||||||| || || |||
Sbjct 587 TATGTGTCGATGAGGAGCGAGTAGGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAG 528
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| ||||| || | | |||||| || | ||| || |||| ||| ||
Sbjct 527 CCGTAGAAGCAGCGCGCTTCAGCGATCTGCACCTCGCCCGAGAAGCGTTCGAGCAGGTTC 468
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
||||||||||||||||| ||| ||||| ||||| || |||||| |||||| || |||
Sbjct 467 TCGTTGACGATGCCGTCCGAGGCAGCGAAGAAGGCAAGGACGTGCGAGATGAAGTGACGC 408
Query 133348 TCGTTGTCGTTCAAGCGCT---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
||||||||||||| ||| | ||||||| | |||||||||||||||||| |||||||
Sbjct 407 TCGTTGTCGTTCAGGCGGTTGCTCCAGTCGTGGATGTCCTTGGACAGGTCCATCTCCTCG 348
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| ||||| ||||| || || ||||||||
Sbjct 347 GCAGTCCAGAACGAGGCCTCAGCCTTCTTGTACAT 313
>seq523
Length=1154
Score = 343 bits (380), Expect = 1e-89
Identities = 459/635 (72%), Gaps = 15/635 (2%)
Strand=Plus/Minus
Query 132814 TGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGC 132873
|||||||||| || || ||||||| ||| ||| || || || | || || ||
Sbjct 941 TGCTCGATGGTAACGGCCTCGGTGATGATGGCCCGCACAACGTCCTCGTTGGGGCGACGC 882
Query 132874 ACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATG 132933
| || |||| | | ||| |||||||| |||| ||||||||| | || |||
Sbjct 881 TTGAGGTGGCTGAAGAGGAGGCAGGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATG 822
Query 132934 AGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCG 132993
|| |||||| ||| || | |||||||||||| ||||| || |||||||| || ||||
Sbjct 821 AGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAC 762
Query 132994 GCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCG 133053
||||| |||||| ||||||| |||||||||||| ||||| || || ||||||||||||
Sbjct 761 GCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCG 702
Query 133054 AACGTGGCTTCTTTGCTGGC----GATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGAC 133109
|||| | || |||| | |||||| |||||||| || ||||| || ||
Sbjct 701 AACGAG----CTCTGCTCGTCGTTGATCCACGTGAGCGCCCACTCAGCCTTGCGCTTCAC 646
Query 133110 GCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGC--ACG 133167
||| || || || ||||| || | || | | | | | || | || | | |
Sbjct 645 GCAGGGGATGGTCTCGATCGCATCGAAGAG--GAACTCGCGCTGCGCCGGCTCCTTAATG 588
Query 133168 TAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAG 133227
|| |||||||||||| ||| || | || ||||| | ||||||||| || || |||
Sbjct 587 TATGTGTCGATGAGGAGCGAGTAGGTCTCAGAGTGGATGTTCTCCATCATAATCTGGAAG 528
Query 133228 CCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTT 133287
||||| ||||| ||||| || | | |||||| || | ||| || |||| ||| ||
Sbjct 527 CCGTAGAAGCAGCGCGCTTCAGCGATCTGCACCTCACCCGAGAAGCGTTCGAGCAGGTTC 468
Query 133288 TCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGC 133347
||||||||||||||||| ||| ||||| ||||| || |||||| |||||| || |||
Sbjct 467 TCGTTGACGATGCCGTCCGAGGCAGCGAAGAAGGCGAGGACGTGCGAGATGAAGTGACGC 408
Query 133348 TCGTTGTCGTTCAAGCGCT---CCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCG 133404
||||||||||||| ||| | ||||||| | |||||||||||||||||| |||||||
Sbjct 407 TCGTTGTCGTTCAGGCGGTTGCTCCAGTCGTGGATGTCCTTGGACAGGTCCATCTCCTCG 348
Query 133405 ACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| ||||| ||||| ||||| || || ||||||||
Sbjct 347 GCAGTCCAGAACGAGGCCTCAGCCTTCTTGTACAT 313
>seq230
Length=49901
Score = 141 bits (156), Expect = 9e-29
Identities = 173/231 (75%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || ||| | |||||||| || ||||| |||| |||||| || |
Sbjct 22510 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 22569
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | |||| | || | || |||| ||||| ||||| || |||||| ||||
Sbjct 22570 GACACGATCGACAACG-TCAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACC 22627
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| ||||| | ||| ||||| ||||| || |||| |||||||| |||||||
Sbjct 22628 AGCAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACA 22687
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
||||||| ||||| |||| ||||| | || || ||| || | |||||||
Sbjct 22688 ACATCCAGAAGGAGTCGACTCTGCACCTTGTCCTCCGTCTGCGCGGCGGCC 22738
Score = 131 bits (144), Expect = 2e-25
Identities = 155/205 (76%), Gaps = 4/205 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
|||||||| ||||| || ||||| || ||||| ||||||||| |||| |||||| | | |
Sbjct 21665 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 21724
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | |||| | || | || || | ||||| ||||| || |||||| ||||
Sbjct 21725 GACACGATCGACAACG-TCAAGGCCAAGATTCAGGACAAGGAGGGCAT-CCCGCCAGACC 21782
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | |||||||| ||||| || |||| || ||||| |||||||
Sbjct 21783 AGCAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACA 21842
Query 38422 ACATCCAAAAGGAAGCGACGCTGCA 38446
||||||| ||||| ||||||| ||
Sbjct 21843 ACATCCAGAAGGAGTCGACGCTCCA 21867
Score = 96.9 bits (106), Expect = 3e-15
Identities = 83/103 (81%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415
||||||| ||||| ||||| | ||||||||| ||||| || |||| |||||||| |
Sbjct 22112 CCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGG 22171
Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||||||||||||| ||||| |||| ||||| ||||||| ||
Sbjct 22172 ACTACAACATCCAGAAGGAGTCGACTCTGCACCTGGTGCTCCG 22214
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415
||||||| ||||| ||||| | ||||||||| ||||| || |||| ||| || ||| |
Sbjct 22394 CCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGTACGCTCTCAG 22453
Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||||| ||||| |||| ||||| | || ||||| | | ||||||
Sbjct 22454 ACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTCCTGCGCCTCCGCGGCGGC 22509
>seq1375
Length=30983
Score = 118 bits (130), Expect = 1e-21
Identities = 168/231 (73%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || |||||||| ||||| |||||||| | || |||||| || |
Sbjct 15703 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGTTGGAAGTCGAGTCCTCG 15644
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACC 38361
|||| | | | |||| | || | || |||| ||||||||||| | ||||||| ||||
Sbjct 15643 GACACCATTGACAACG-TGAAGGCGAAGATCCAGGACAAAGAGGGTA-TCCCGCCAGACC 15586
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| | || | ||||||||| ||||| || || | ||||| || || ||||
Sbjct 15585 AGCAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCGGATTACA 15526
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||| || ||||| |||| || || | || || ||| | | || ||||
Sbjct 15525 ACATTCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGTGGTGGCC 15475
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||||||||| || ||||| | || |||||| | | |
Sbjct 15931 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTTGAGGTCGAGTCGAGC 15872
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | || | || |||| || || ||||| || || |||||||
Sbjct 15871 GACACTATCGACAATGTCAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 15812
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||||| ||||| | ||| || || ||||| || |||| ||||| || |||||||||
Sbjct 15811 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 15752
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|| || ||||| | || ||||| | || || ||| | | |||||
Sbjct 15751 ATTCAGAAGGAGTCCACCCTGCACCTCGTCCTCCGTCTCCGCGGCGG 15705
Score = 91.5 bits (100), Expect = 1e-13
Identities = 94/122 (77%), Gaps = 1/122 (1%)
Strand=Plus/Minus
Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
||||||| ||||| ||||| || || | ||||||||| ||||| || || | || || |
Sbjct 16053 TCCCGCCCGACCAGCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGATGGCCGTACTC 15994
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCG 38469
|| ||||||||||||||| ||||| ||||||| || | ||||| || || | ||||
Sbjct 15993 TCTCCGACTACAACATCCAGAAGGAGTCGACGCTCCACCTCGTGCTCCGCCTGCGCGGCG 15934
Query 38470 GC 38471
||
Sbjct 15933 GC 15932
>seq231
Length=27061
Score = 111 bits (122), Expect = 2e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || | |||||||| || ||||| | || |||||| || |
Sbjct 700 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACGATCACGCTGGAGGTCGAGTCCTCG 759
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCC-GACCA 38362
|||| | | | | || | || |||| ||||| ||||| || |||||| |||||
Sbjct 760 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCAT-CCCGCCAGACCA 818
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| ||||| | ||| || || ||||| || || | |||||||| || |||||
Sbjct 819 GCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAA 878
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| ||||| |||| ||||| | || || ||| || | || ||||
Sbjct 879 CATCCAGAAGGAGTCGACTCTGCACCTTGTCCTTCGTCTGCGCGGTGGCC 928
Score = 93.3 bits (102), Expect = 4e-14
Identities = 90/116 (78%), Gaps = 0/116 (0%)
Strand=Plus/Plus
Query 38356 CCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACG 38415
||||||| ||||| ||||||| ||||||||| ||||| || |||| ||| || ||| |
Sbjct 584 CCGACCAGCAGCGCCTCATTTTCGCGGGCAAGCAGCTCGAGGACGGGCGTACGCTCTCGG 643
Query 38416 ACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
||||||||||||| ||||| | || || || | || ||||| || | ||||||
Sbjct 644 ACTACAACATCCAGAAGGAGTCCACCCTACACCTCGTCCTGCGCCTGCGCGGCGGC 699
>seq1288
Length=8444
Score = 104 bits (114), Expect = 2e-17
Identities = 89/109 (82%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
||||||| ||||| ||||| || || | ||| ||||| ||||| || |||| |||||||
Sbjct 427 TCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCC 486
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| ||||||||||||||||||||| ||||||| || | || |||||
Sbjct 487 TCAGCGACTACAACATCCAAAAGGAGTCGACGCTCCACCTCGTCCTGCG 535
>seq1287
Length=7882
Score = 104 bits (114), Expect = 2e-17
Identities = 89/109 (82%), Gaps = 1/109 (1%)
Strand=Plus/Plus
Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
||||||| ||||| ||||| || || | ||| ||||| ||||| || |||| |||||||
Sbjct 428 TCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCC 487
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
||| ||||||||||||||||||||| ||||||| || | || |||||
Sbjct 488 TCAGCGACTACAACATCCAAAAGGAGTCGACGCTCCACCTCGTCCTGCG 536
>seq464
Length=19301
Score = 86.0 bits (94), Expect = 6e-12
Identities = 85/109 (78%), Gaps = 1/109 (1%)
Strand=Plus/Minus
Query 38351 TCCCGCC-GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCC 38409
||||||| ||||| ||||| ||||| | ||| ||||| ||||| || |||| ||||| |
Sbjct 3705 TCCCGCCCGACCAGCAGCGCCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGCCGCACTC 3646
Query 38410 TCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458
| ||||||||||||||| ||||| |||| || || | ||||| ||
Sbjct 3645 TTTCCGACTACAACATCCAGAAGGAGTCGACTCTCCACCTCGTGCTCCG 3597
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500117224549760
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