Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq230 178 2e-39 seq231 168 9e-37 seq1911 165 1e-35 seq294 132 6e-26 seq1375 102 1e-16 seq1288 102 1e-16 seq1287 102 1e-16 seq464 98.7 1e-15 seq1912 89.7 7e-13 >seq230 Length=49901 Score = 178 bits (196), Expect = 2e-39 Identities = 163/206 (79%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| || || || || || || |||||||||||||| |||||| Sbjct 21665 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 21724 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| ||||||||||| || ||||| ||||| || || || ||| Sbjct 21725 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAG 21784 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| ||||| || || ||||| || || || |||||||| | || |||||| Sbjct 21785 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAAC 21844 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| || || ||||| Sbjct 21845 ATCCAGAAGGAGTCGACGCTCCACCT 21870 >seq231 Length=27061 Score = 168 bits (186), Expect = 9e-37 Identities = 161/206 (78%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| ||||| || || || || || || |||||||||||||| |||||||| Sbjct 134 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 193 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 ||||| ||||| ||| |||| || ||||| || || ||||| ||||| || ||||| ||| Sbjct 194 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 253 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 || || ||||| ||||| || || ||||| || || || || || || | || ||||| Sbjct 254 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAT 313 Query 172042 GTTCAAAAGGAGTCTACTCTACACCT 172067 | || |||||||| || || ||||| Sbjct 314 ATCCAGAAGGAGTCGACGCTCCACCT 339 Score = 93.3 bits (102), Expect = 6e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 ||||||||||||| || || ||||| || || || || ||||| |||||||| |||||| Sbjct 416 GTATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCGA 475 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| | || || |||||||| || ||||| || Sbjct 476 GCGACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGG 521 >seq1911 Length=11305 Score = 165 bits (182), Expect = 1e-35 Identities = 255/360 (71%), Gaps = 8/360 (2%) Strand=Plus/Plus Query 195632 CCCGAAGAAATTTCGTCTATGGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATG 195691 ||||| || || ||||||||| | | | |||||||||||||| || || | | | | Sbjct 4402 CCCGAGGAGATCTCGTCTATGATCCTCCTGAAGATGAAGGAGACCGCTGAGGCGTACCTC 4461 Query 195692 GGTAAAACTGTGAAAGATGCAGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGA 195751 || ||||| || | || || || || || || || ||||||| ||| || || || Sbjct 4462 GGCTCCACTGTCAACAACGCCGTCGTCACCGTCCCCGCCTACTTCAATGACTCGCAGCGT 4521 Query 195752 CAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACTGT-CTTAGAATTATCAATGA 195810 ||||| || |||||||| | | | || ||||||| || ||| || | || ||||| || Sbjct 4522 CAGGCAACCAAGGACGCCGGTACCATCTCGGGTCTCAA-TGTCCTCCGTATCATCAACGA 4580 Query 195811 ACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACAAGGACGAAGATAA---AAA 195867 || || || || || || || || ||||| |||||| |||| || | | | || Sbjct 4581 GCCCACCGCCGCCGCCATCGCCTACGGTCTCGACAAG---AAGGTCGTGGGTGAGCGCAA 4637 Query 195868 TGTATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGG 195927 || | ||||| || |||||||| || || || |||||||| || |||| || || | Sbjct 4638 CGTCCTCATCTTCGACCTCGGTGGAGGAACCTTCGATGTCTCGCTCCTCACCATCGAGGA 4697 Query 195928 TGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 || || ||||| || ||||| ||||| ||||| || || || |||||||| || ||||| Sbjct 4698 GGGCATCTTCGAGGTCAAGGCCACTGCCGGTGACACCCACCTTGGTGGTGAGGACTTCGA 4757 >seq294 Length=64402 Score = 132 bits (146), Expect = 6e-26 Identities = 189/266 (71%), Gaps = 0/266 (0%) Strand=Plus/Minus Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| ||||||| || || || || | ||||| |||||||| | ||| || || Sbjct 58978 GTCCCTGCCTACTTCAACGACTCCCAGCGTCTCGCGACCAAGGACGCGGGTGCGATCGCT 58919 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 ||||| || ||| | || ||||| || || || || || || || || || ||||| Sbjct 58918 GGTCTTGACGTTCTCCGTATCATCAACGAGCCGACCGCCGCCGCCATCGCCTACGGTCTC 58859 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||| | || | || || || || | ||||| |||||||||||||| || || Sbjct 58858 GACCGCCAGGCTGAGGGCGAGAAGAACGTGCTCATCTTCGATCTCGGTGGTGGAACTTTC 58799 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 |||||||| || ||||| || || ||| | |||| || |||||||| |||||||| Sbjct 58798 GATGTCTCGCTCCTCAACATCTCCGGCGGTGTCTTCGCGGTGAAGGCTACCGCTGGTGAC 58739 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGA 195987 || || || ||||| || || ||||| Sbjct 58738 ACCCACCTTGGTGGCGAGGACTTCGA 58713 >seq1375 Length=30983 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||||||||| || || ||||| || || || || |||||||||||||||||||| || Sbjct 16212 ATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 16153 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| |||||||| || || ||||| || Sbjct 16152 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 16109 >seq1288 Length=8444 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| |||||||| || || || |||||||||||||| ||||| || Sbjct 263 ATGCAGATCTTCGTGAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 322 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| |||||||| || || ||||| || Sbjct 323 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 366 >seq1287 Length=7882 Score = 102 bits (112), Expect = 1e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| ||||| |||||||| || || || |||||||||||||| ||||| || Sbjct 263 ATGCAGATCTTCGTGAAGACCCTTACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCG 322 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| || |||| |||||||| || || ||||| || Sbjct 323 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 366 >seq464 Length=19301 Score = 98.7 bits (108), Expect = 1e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 ||||| ||||| || || ||||| || || || || |||||||||||||| ||||| || Sbjct 3875 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTGGAGTCTTCG 3816 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGG 171965 ||||| ||||| ||| |||| |||||||| || || ||||| || Sbjct 3815 GACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 3772 >seq1912 Length=31356 Score = 89.7 bits (98), Expect = 7e-13 Identities = 176/257 (68%), Gaps = 5/257 (2%) Strand=Plus/Plus Query 195732 ACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCGGGTCTAAACT 195791 |||||| || | || || |||||||| |||||||| | || ||||| ||||| ||| Sbjct 21358 ACTTCAACGACGCGCAGCGTCAGGCGACCAAGGACGCCGGTGTCATTGCCGGTCTCAACG 21417 Query 195792 GTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTGGACAAGAACA 195851 || | || ||||| || || || || || || || || || || || |||||||| Sbjct 21418 TCCTCCGTATCATCAACGAGCCGACGGCCGCCGCGATCGCGTACGGCCTCGACAAGAA-- 21475 Query 195852 AGGACGAAGATAAAAATGT-ATTGATCTTTGATCTCGGTGGTGGTACGTTTGATGTCTCA 195910 || || || | | |||| ||| || |||||||||||||| || |||||||| Sbjct 21476 -GGGCGGCGAGCAGCGCATCATTG-TCTACGACCTCGGTGGTGGTACCTTCGATGTCTCT 21533 Query 195911 CTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGATACTCATCTA 195970 || || || || | ||| | ||||| || || || || || || || || || Sbjct 21534 CTCCTGTCCATCGACGATGGCGTCTTCGAGGTTCTCGCGACCGCCGGCGACACCCACCTT 21593 Query 195971 GGTGGTGAAGATTTCGA 195987 ||||| || || ||||| Sbjct 21594 GGTGGCGAGGACTTCGA 21610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657789303264080