Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq8651 127 2e-24 >seq8651 Length=7692 Score = 127 bits (140), Expect = 2e-24 Identities = 188/264 (71%), Gaps = 2/264 (1%) Strand=Plus/Minus Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 |||||| || |||||||| || | || | || | |||||||||| |||||| || Sbjct 5464 GATGAGATCCGTCTCCGGATTCTTGCAGCTCTTGCAGAGCACAAACTTGTCGATGAAGCC 5405 Query 34371 ATCAAGCAGGTCCTGTAA-CTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGT 34429 || || || || | | | || | ||||||| ||||||||| ||| | || || Sbjct 5404 GTCGAGGAGCTCACGCATGCGGGTCGCA-TCGTGGGCGCCGTTGACAATGTAGCGCTCAG 5346 Query 34430 TTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAA 34489 | || | |||| | ||| || || || |||||||| |||||| |||| || || || Sbjct 5345 TCTTATCGTCGAACGTCGTCTGGGCACCGAGCTCGCAGCCGAAGAACTTGGTGGGATAGG 5286 Query 34490 TGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGC 34549 || ||| || || || |||| |||| ||||||| ||||||||||||||||| Sbjct 5285 AGGGCGGGCGCGAGAGAGCGCGAGCGACATCGGACATGTTGGGGATGACAGTCTTGATGC 5226 Query 34550 CGTTGCCCTTTCCTTCGACCTTGG 34573 |||||||||||||||| | ||||| Sbjct 5225 CGTTGCCCTTTCCTTCAATCTTGG 5202 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412796874934277