Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 96.9 3e-15
>seq1375
Length=30983
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | || || || || || || |||||||| ||||||| || ||||||
Sbjct 15488 ACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGAAAGAGTGCGACC 15547
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| ||||| || ||||| || | ||||| | ||||| || ||||| |||||||||||
Sbjct 15548 ATCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGGGATACCCTCTTT 15607
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || || | || | ||||| || || ||||| | || ||
Sbjct 15608 GTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGGACTCGACTTCCAACGTGAT 15667
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| ||||| || | || || || || ||||||||
Sbjct 15668 GGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 15703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385177467398349
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |