Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 102 5e-17
seq231 93.3 3e-14
>seq1375
Length=30983
Score = 102 bits (112), Expect = 5e-17
Identities = 147/205 (72%), Gaps = 2/205 (1%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| ||||| ||| || || ||||||||||| || || ||||| | || || | ||
Sbjct 15501 TGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGAAAGAGTGCGACCATCCTCGAGCTGC 15560
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|| || || || |||||||||||||| ||| |||| | ||| |||||||| || |||
Sbjct 15561 TTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGGGATACCCTCTTTGTCCTGGATCTTC 15620
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
||| || | ||| | |||||| || || || || | |||||| || || || ||
Sbjct 15621 GCCTTC-ACGTTGTCAATGGTGTCCGAGGACTCGACTTCCAACGTGATGGTCTTGCCGGT 15679
Query 33726 TAACGTTTTTACAAAGATCTGCATA 33750
| ||| || || ||||||||||||
Sbjct 15680 GAGCGTCTTGACGAAGATCTGCATA 15704
Score = 91.5 bits (100), Expect = 1e-13
Identities = 144/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Plus
Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606
|| || ||| ||| || || |||||||| || || || ||||| |||| || | ||
Sbjct 15729 TGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGC 15788
Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666
|||||||| || || | ||||||||| || | || | || || || || || |||
Sbjct 15789 TTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTC 15848
Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725
|| | ||| ||| | |||||||| || || || |||| ||||||||| || || ||
Sbjct 15849 GCCTTGA-CATTGTCGATAGTGTCGCTCGACTCGACCTCAAGCGTGATCGTCTTGCCCGT 15907
Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749
| || || || |||||||||||
Sbjct 15908 GAGGGTCTTGACGAAGATCTGCAT 15931
>seq231
Length=27061
Score = 93.3 bits (102), Expect = 3e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
||||| | || ||| | || | || ||||| ||| || || ||||||||||| ||
Sbjct 926 CCACCGCGCAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGAA 867
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| ||||| | || || | || |||||||| || || | ||||||||| ||| ||||
Sbjct 866 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGG 807
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| || || ||||| || ||| | | |||| ||| | ||||| || || ||
Sbjct 806 ATGCCCTCCTTGTCCTGGATCTTC-GCCTTGACATTGTCGATCGTGTCCGAGGACTCGAC 748
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| | ||||||||| || || || || || || || |||||||||||
Sbjct 747 CTCCAGCGTGATCGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328668389954880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |