Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq4264 118 1e-21
seq1375 82.4 7e-11
seq522 82.4 7e-11
>seq4264
Length=4713
Score = 118 bits (130), Expect = 1e-21
Identities = 142/193 (74%), Gaps = 0/193 (0%)
Strand=Plus/Plus
Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294
||||||||||||| || || ||||| |||||||| ||||| | ||||| |||||||
Sbjct 3282 GATACGTCTCAATCGCACGCTCAATGTCCTCGCCGTGGATGCCGACGGCGACCCGCATGA 3341
Query 148295 GCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGA 148354
||| ||| || ||||| || |||| | |||||||||||||| || ||| ||||
Sbjct 3342 GCAGGTGTTGCGGTCGCTCAACAACCTTGTTGTTGATCTTGAGGAGGTATGACCGCTCGA 3401
Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCATCTA 148414
|||| ||| |||| ||| | ||||| | || || | ||||| |||||| | || |
Sbjct 3402 GGGTCTTGAAACCGAAGAAGTTGTACTGGAAGTCCCGGTCGTAGATGATGGCAGAGTCCA 3461
Query 148415 GTGTCTCAGCATG 148427
||| ||||| ||
Sbjct 3462 GTGCTTCAGCGTG 3474
>seq1375
Length=30983
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/195 (69%), Gaps = 0/195 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || |||||||||||||| | || || || |||||||| || ||||
Sbjct 15738 GACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCG 15797
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| ||||| || ||||| || || || |
Sbjct 15798 AAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACA 15857
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | ||| ||| ||| ||| || || | ||| | ||| || || || || || ||
Sbjct 15858 TTGTCGATAGTGTCGCTCGACTCGACCTCAAGCGTGATCGTCTTGCCCGTGAGGGTCTTG 15917
Query 132110 ATGAAAATCTGCATG 132124
| ||| |||||||||
Sbjct 15918 ACGAAGATCTGCATG 15932
>seq522
Length=1154
Score = 82.4 bits (90), Expect = 7e-11
Identities = 166/245 (68%), Gaps = 6/245 (2%)
Strand=Plus/Plus
Query 46744 ATGCGTTCGAGCACGTGCCATGCGTT---CGCAAAAAGGCCCAGTGGGCCATGAAGTGGA 46800
||||| ||||| | | || ||||| ||||| ||| ||||||| | | |||||
Sbjct 623 ATGCGATCGAGACCATCCCCTGCGTGAAGCGCAA---GGCTGAGTGGGCGCTCACGTGGA 679
Query 46801 TCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCG 46860
|| | |||| | || | | ||||||| | || || ||||| ||||| |||
Sbjct 680 TCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGTTGCGTTCGCCGCCGTCGAGGGCA 739
Query 46861 TGtttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGG 46920
| || || |||||| || ||| |||| || | | || | || | ||||| |
Sbjct 740 TCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCG 799
Query 46921 GCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGT 46980
|||| || ||| |||||| | |||||||||||||| || | |||||||||||||| |
Sbjct 800 GCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCATGCACACGGACTTTGCCT 859
Query 46981 GTCTC 46985
| |||
Sbjct 860 GCCTC 864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476558242538040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |