Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4264 118 1e-21 seq1375 82.4 7e-11 seq522 82.4 7e-11 >seq4264 Length=4713 Score = 118 bits (130), Expect = 1e-21 Identities = 142/193 (74%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 148235 GATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGA 148294 ||||||||||||| || || ||||| |||||||| ||||| | ||||| ||||||| Sbjct 3282 GATACGTCTCAATCGCACGCTCAATGTCCTCGCCGTGGATGCCGACGGCGACCCGCATGA 3341 Query 148295 GCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGA 148354 ||| ||| || ||||| || |||| | |||||||||||||| || ||| |||| Sbjct 3342 GCAGGTGTTGCGGTCGCTCAACAACCTTGTTGTTGATCTTGAGGAGGTATGACCGCTCGA 3401 Query 148355 GGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCGCATCTA 148414 |||| ||| |||| ||| | ||||| | || || | ||||| |||||| | || | Sbjct 3402 GGGTCTTGAAACCGAAGAAGTTGTACTGGAAGTCCCGGTCGTAGATGATGGCAGAGTCCA 3461 Query 148415 GTGTCTCAGCATG 148427 ||| ||||| || Sbjct 3462 GTGCTTCAGCGTG 3474 >seq1375 Length=30983 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || |||||||||||||| | || || || |||||||| || |||| Sbjct 15738 GACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCG 15797 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || || ||||| ||||| || ||||| || || || | Sbjct 15798 AAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGGATCTTCGCCTTGACA 15857 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| ||| ||| ||| || || | ||| | ||| || || || || || || Sbjct 15858 TTGTCGATAGTGTCGCTCGACTCGACCTCAAGCGTGATCGTCTTGCCCGTGAGGGTCTTG 15917 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 15918 ACGAAGATCTGCATG 15932 >seq522 Length=1154 Score = 82.4 bits (90), Expect = 7e-11 Identities = 166/245 (68%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 46744 ATGCGTTCGAGCACGTGCCATGCGTT---CGCAAAAAGGCCCAGTGGGCCATGAAGTGGA 46800 ||||| ||||| | | || ||||| ||||| ||| ||||||| | | ||||| Sbjct 623 ATGCGATCGAGACCATCCCCTGCGTGAAGCGCAA---GGCTGAGTGGGCGCTCACGTGGA 679 Query 46801 TCGAGAGCGAGACCGCCACGCTGGCCGAGCGCATGGTGGCATTCGCGATAGTCGAAGGCG 46860 || | |||| | || | | ||||||| | || || ||||| ||||| ||| Sbjct 680 TCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTCGTTGCGTTCGCCGCCGTCGAGGGCA 739 Query 46861 TGtttttttCGGGCAGTTTTGCCGCCATTTTTTACATTAAAACCAAAGGCATAATGCCGG 46920 | || || |||||| || ||| |||| || | | || | || | ||||| | Sbjct 740 TCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCG 799 Query 46921 GCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGACTTTGCGT 46980 |||| || ||| |||||| | |||||||||||||| || | |||||||||||||| | Sbjct 800 GCCTCACCTTCTCCAACGAGCTCATCTCGCGCGACGAGGGCATGCACACGGACTTTGCCT 859 Query 46981 GTCTC 46985 | ||| Sbjct 860 GCCTC 864 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476558242538040