Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq973 143 3e-29 >seq973 Length=1292 Score = 143 bits (158), Expect = 3e-29 Identities = 291/420 (69%), Gaps = 14/420 (3%) Strand=Plus/Plus Query 147160 GCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCG--GGGTTCCTCTTAATCTCTT 147217 ||||||||||| || || | | | || || | || || ||||| ||| |||| | Sbjct 357 GCGGGGTTCCACGCAGACAAGATAATCCTCC-GATC-CGTCGGGTTGTGCTTGATCTTCT 414 Query 147218 CGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTG-TCCCGCAGTCCACG 147276 |||| | | |||| ||||||||||| | |||| |||| || ||||| || ||| Sbjct 415 CGATGCACTCCTTCAGTTGGTCCACGCCTTTGCCCGTATAGTCTGCGTCCGCA-TCGACG 473 Query 147277 TACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTT 147336 ||| ||||| ||||| | |||||||||||| || || ||||| || ||||| | | Sbjct 474 TACTCAGCCCCGAAGTGTCGCCACTGGAAGCCATAGACCGGCCCGAGATCGCCTTCCCGT 533 Query 147337 CTGTGCGAGAAGCCCGCCCG-CTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCC 147395 | |||||| || |||| || | |||||| || | || || | | |||||||||||| Sbjct 534 CGATGCGAG-AGGCCGCGCGAGTCGAGAAAGGCGCGCGAGCCATTGCCGTCCCAGATGCG 592 Query 147396 CACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 || |||| ||||||||| | ||||| || | ||| |||||||||||||| ||||| Sbjct 593 GACGCCCTGAGCGGAGAGCAAGGTCGAGTCTGTTGCGCCACGGATGAACCAGAGAAGCTC 652 Query 147456 CTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGAAC---TGGTCCCT 147512 ||| | ||| || || || ||| ||||||| ||| |||| | |||| | Sbjct 653 GGCCAGGATGCCCTTCAGGAACGTCCGCTTCGTGGTCAACAGTGGGAGCGTGTGGTTCGC 712 Query 147513 CAGCGA-ATACCTCGCCTGGTC--CCCAAACACAGACAGCGTGCCCGTGCCCGTCCTGTC 147569 ||||| | | | ||| | | | || | |||||| || || |||||||| ||||| Sbjct 713 AAGCGAGAAGCGGAGGTTGGGCGGCGCGAAGAGAGACAGGGTCCCTGTGCCCGTTCTGTC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583423167189600