Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq2737 91.5 2e-13 seq1091 84.2 3e-11 >seq2737 Length=8053 Score = 91.5 bits (100), Expect = 2e-13 Identities = 152/220 (69%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 ||||||||||||| ||| |||| | || || ||| |||||||||||| || | Sbjct 539 TCTACCAGGCATCGACCTCTGAGCTTTACGGCAAGGTCGTTGAGACACCACAGTCGGAGA 480 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432 | || || |||||||| || || || || || || || || ||||| | | ||||| | Sbjct 479 CGACGCCGTTCTACCCGCGCTCGCCGTACGGTGTCGCCAAGCTCTACGCGTTCTGGATCG 420 Query 161433 TAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATG 161492 | |||||| | ||| || || ||| |||| | | || || || |||||||| | Sbjct 419 TCGTCAACTACCGCGAGGCGTACGGCATGTACGCATGCAACGGCATCCTGTTCAACCACG 360 Query 161493 AGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532 || || || || || ||| ||||| ||||| ||||| Sbjct 359 AGAGCCCTCGCCGTGGGCGGACCTTCGTCACCCGCAAGAT 320 >seq1091 Length=5350 Score = 84.2 bits (92), Expect = 3e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 161354 GAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAA 161413 |||||||| ||| || || || || |||||||| || || || || || || || ||| Sbjct 4532 GAGACACCGCAGTCCGAGACTACGCCGTTCTACCCCCGCTCGCCGTACGGTGTCGCCAAA 4473 Query 161414 CTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGT 161473 ||||| | ||| ||||| || | |||| | ||| || || ||| |||| | | Sbjct 4472 CTCTACGCATACTGGATCGTCGTCAGCTACCGTGAGGCGTACGGCATGTACGCATGCAAC 4413 Query 161474 GGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532 || || || |||||||| || ||||| || || ||| ||||| ||||||||||| Sbjct 4412 GGCATCCTGTTCAACCACGAAAGCCCACGTCGTGGAAGGACCTTCGTCACCCGTAAGAT 4354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729848495697320