Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq2737 91.5 2e-13
seq1091 84.2 3e-11
>seq2737
Length=8053
Score = 91.5 bits (100), Expect = 2e-13
Identities = 152/220 (69%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372
||||||||||||| ||| |||| | || || ||| |||||||||||| || |
Sbjct 539 TCTACCAGGCATCGACCTCTGAGCTTTACGGCAAGGTCGTTGAGACACCACAGTCGGAGA 480
Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432
| || || |||||||| || || || || || || || || ||||| | | ||||| |
Sbjct 479 CGACGCCGTTCTACCCGCGCTCGCCGTACGGTGTCGCCAAGCTCTACGCGTTCTGGATCG 420
Query 161433 TAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGTGGTATTCTATTCAACCATG 161492
| |||||| | ||| || || ||| |||| | | || || || |||||||| |
Sbjct 419 TCGTCAACTACCGCGAGGCGTACGGCATGTACGCATGCAACGGCATCCTGTTCAACCACG 360
Query 161493 AGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532
|| || || || || ||| ||||| ||||| |||||
Sbjct 359 AGAGCCCTCGCCGTGGGCGGACCTTCGTCACCCGCAAGAT 320
>seq1091
Length=5350
Score = 84.2 bits (92), Expect = 3e-11
Identities = 126/179 (70%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 161354 GAGACACCACAGAAAGAAACAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAA 161413
|||||||| ||| || || || || |||||||| || || || || || || || |||
Sbjct 4532 GAGACACCGCAGTCCGAGACTACGCCGTTCTACCCCCGCTCGCCGTACGGTGTCGCCAAA 4473
Query 161414 CTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCCAGTAGT 161473
||||| | ||| ||||| || | |||| | ||| || || ||| |||| | |
Sbjct 4472 CTCTACGCATACTGGATCGTCGTCAGCTACCGTGAGGCGTACGGCATGTACGCATGCAAC 4413
Query 161474 GGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGTAAGAT 161532
|| || || |||||||| || ||||| || || ||| ||||| |||||||||||
Sbjct 4412 GGCATCCTGTTCAACCACGAAAGCCCACGTCGTGGAAGGACCTTCGTCACCCGTAAGAT 4354
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729848495697320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |