Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_027213.1
Length=214699
Score E
Sequences producing significant alignments: (Bits) Value
seq523 96.9 5e-15
seq522 96.9 5e-15
>seq523
Length=1154
Score = 96.9 bits (106), Expect = 5e-15
Identities = 357/558 (64%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| || | |||||| || | || | ||||| || || |||||
Sbjct 861 GCAGGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 802
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| || || ||||| |||||||| || |||| || || || || || |||||
Sbjct 801 GCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGACGCGAACGAGCCCGAGAAGAA 742
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG---TAACTTGTATCATTATG 39792
|||||| || || || || || ||||| || | ||| ||| | || || | |
Sbjct 741 GATGCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTT 682
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | | ||||| ||||| || ||| || || || || || || || ||||
Sbjct 681 GATCCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATC 622
Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||||| | | | | || |||| ||||| || || | || || |
Sbjct 621 GAAGAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGT 562
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
|| || |||||||| || ||| ||||| || ||||| || || | ||||||| ||
Sbjct 561 CTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGAT 502
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
|| ||||| | || | ||| || || || || || || || || || ||
Sbjct 501 CTGCACCTCACCCGAGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGC 442
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089
|| || || | || || || || | || | | ||| || ||||
Sbjct 441 GAAGAAGGCGAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCA 382
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
||| | ||| || || || | || | || || || ||||| ||||| ||||| |||||
Sbjct 381 GTCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCAGAACGAGGCCTCAGCCTT 322
Query 40150 TTTGTACATGTTCCATAT 40167
|||||||| | ||||||
Sbjct 321 CTTGTACATCTGCCATAT 304
>seq522
Length=1154
Score = 96.9 bits (106), Expect = 5e-15
Identities = 357/558 (64%), Gaps = 6/558 (1%)
Strand=Plus/Minus
Query 39616 GCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAG 39675
|||||| ||||| || | |||||| || | || | ||||| || || |||||
Sbjct 861 GCAGGCAAAGTCCGTGTGCATGCCCTCGTCGCGCGAGATGAGCTCGTTGGAGAAGGTGAG 802
Query 39676 TCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAA 39735
|| ||||| || || ||||| |||||||| || |||| || || || || || |||||
Sbjct 801 GCCGGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAA 742
Query 39736 GATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCG---TAACTTGTATCATTATG 39792
|||||| || || || || || ||||| || | ||| ||| | || || | |
Sbjct 741 GATGCCCTCGACGGCGGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTT 682
Query 39793 TATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCATT 39852
|||||| | | ||||| ||||| || ||| || || || || || || || ||||
Sbjct 681 GATCCACGTGAGCGCCCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATC 622
Query 39853 AAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACAT 39912
||||| | | | | || |||| ||||| || || | || || |
Sbjct 621 GAAGAGGAACTCGCGCTGCGCCGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGT 562
Query 39913 TTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAAT 39972
|| || |||||||| || ||| ||||| || ||||| || || | ||||||| ||
Sbjct 561 CTCAGAGTGGATGTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGAT 502
Query 39973 TTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGC 40032
|| ||||| | || | ||| || || || || || || || || || ||
Sbjct 501 CTGCACCTCGCCCGAGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGC 442
Query 40033 AAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTATTCCA 40089
|| || || | || || || || | || | | ||| || ||||
Sbjct 441 GAAGAAGGCAAGGACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGCGGTTGCTCCA 382
Query 40090 GTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTT 40149
||| | ||| || || || | || | || || || ||||| ||||| ||||| |||||
Sbjct 381 GTCGTGGATGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCAGAACGAGGCCTCAGCCTT 322
Query 40150 TTTGTACATGTTCCATAT 40167
|||||||| | ||||||
Sbjct 321 CTTGTACATCTGCCATAT 304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 686832475845960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |