Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq4264 84.2 7e-11
seq522 84.2 7e-11
>seq4264
Length=4713
Score = 84.2 bits (92), Expect = 7e-11
Identities = 70/86 (81%), Gaps = 0/86 (0%)
Strand=Plus/Minus
Query 256535 CACTTTTACGGGTGGCGAAACGGCCTGAAGACGGGCATGTACTACCTGCGCACCCGACCA 256594
||||| ||||| ||| | ||| || |||||||||||||||||||| || ||||| |||
Sbjct 1533 CACTTCTACGGCTGGAAGAGCGGGCTCAAGACGGGCATGTACTACCTCCGTACCCGCCCA 1474
Query 256595 GCGGCCGACCCGATCCAATTCACCGT 256620
|| || || ||||||| ||||||||
Sbjct 1473 GCCGCGAACGCGATCCAGTTCACCGT 1448
>seq522
Length=1154
Score = 84.2 bits (92), Expect = 7e-11
Identities = 123/173 (71%), Gaps = 1/173 (1%)
Strand=Plus/Plus
Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759
|||| |||||| || || || || || | ||||| || | || || ||| | ||
Sbjct 700 TTCGGCGAGCGCCTCGTTGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCT-CGTT 758
Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819
||||||||||||||| | || ||||| ||||| |||| ||| || ||||| |||||
Sbjct 759 CGCCTCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGA 818
Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACA 443872
|| ||| || |||||||| |||| ||||| ||||| || |||| ||
Sbjct 819 GCTCATCTCGCGCGACGAGGGCATGCACACGGACTTTGCCTGCCTCCTCTTCA 871
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588155103916605
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |