Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq473 123 3e-23
seq523 107 2e-18
seq522 107 2e-18
>seq473
Length=15333
Score = 123 bits (136), Expect = 3e-23
Identities = 220/311 (71%), Gaps = 10/311 (3%)
Strand=Plus/Plus
Query 169201 ATCCGTCATGATCATGAGACGACCATACCG-AAGCTCGGAAACATCTTGA-TAGTCCTTA 169258
||||||||||||||||||||||||||| || ||||| ||| | | || || |||||
Sbjct 3031 ATCCGTCATGATCATGAGACGACCATAGCGCAAGCT-GGAGGTGT-TCGAGTACTCCTTG 3088
Query 169259 CCCTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGT 169318
|| ||||||| ||||||||||| | | || ||||| ||| ||| |||
Sbjct 3089 TTGTGCACGAGACCCATGATCTTCTTGATGTTCTGGATCTCTTCGTTCTTCATGATCTG- 3147
Query 169319 GTGACAGA-GGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTG 169377
|| | ||| |||||||| || ||| ||||| || ||||| || ||| |||
Sbjct 3148 GTCATGCTTGGCCTCGCGAACGTTGAGGAGCTTGCCACGCAGTGGGAACACGCCGAAGTT 3207
Query 169378 ATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGT 169437
|| ||||| |||||| ||| || || | || || ||||| ||||| |||||||||||
Sbjct 3208 GTCGCGACCGACGACGCCGAGTCCGGCAATCGCAAGCGTCTTGGCCGAATCACCCTCGGT 3267
Query 169438 GACGATGAGCGTACA--TTTTCCAGATTGTGCCGTACCCGCCTTGTTCGCATCATCCAAT 169495
| ||||||||| || |||| | | ||| | || || |||||||| || || |
Sbjct 3268 TAGGATGAGCGTGCAGTCTTTCGCGTTCTTGC--TCCCTGCGTTGTTCGCGTCCGACAGT 3325
Query 169496 TTGGGAATACC 169506
||||||| |||
Sbjct 3326 TTGGGAAGACC 3336
>seq523
Length=1154
Score = 107 bits (118), Expect = 2e-18
Identities = 117/153 (76%), Gaps = 2/153 (1%)
Strand=Plus/Plus
Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCG-C 94862
||||| ||| | || || || || ||||| ||||||||||| || || ||| ||| |
Sbjct 706 GAGCGCCTCGTTGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTC-GCGTC 764
Query 94863 TATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTAT 94922
|| | |||||||||||||| || |||||||| || ||| ||||||||||||||| ||
Sbjct 765 CATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCAT 824
Query 94923 CTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
||| || |||||||| | ||| || |||||
Sbjct 825 CTCGCGCGACGAGGGCATGCACACGGACTTTGC 857
>seq522
Length=1154
Score = 107 bits (118), Expect = 2e-18
Identities = 115/152 (76%), Gaps = 0/152 (0%)
Strand=Plus/Plus
Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863
||||| ||| | || || || || ||||| ||||||||||| || || ||| | |
Sbjct 706 GAGCGCCTCGTTGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCC 765
Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923
|| | |||||||||||||| || |||||||| || ||| ||||||||||||||| |||
Sbjct 766 ATCTTCTGGCTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATC 825
Query 94924 TCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
|| || |||||||| | ||| || |||||
Sbjct 826 TCGCGCGACGAGGGCATGCACACGGACTTTGC 857
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583195992434360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |