Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq231 167 3e-36 seq230 165 9e-36 seq1375 163 3e-35 seq4264 152 6e-32 seq2737 114 1e-20 seq523 98.7 1e-15 seq522 98.7 1e-15 seq473 95.1 1e-14 seq1288 84.2 2e-11 seq1287 84.2 2e-11 seq1091 82.4 9e-11 >seq231 Length=27061 Score = 167 bits (184), Expect = 3e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| | || |||||||| || || || ||||| ||||| Sbjct 700 ATGCAGATCTTCGTCAAGACATTGACGGGCAAGACGATCACGCTGGAGGTCGAGTCCTCG 759 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || |||||||||||||| || || ||||||||| Sbjct 760 GACACGATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 819 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||||| || ||||| | || || || Sbjct 820 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAAC 879 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || ||||| || || ||| | ||||| |||||||| || Sbjct 880 ATCCAGAAGGAGTCGACTCTGCACCTTGTCCTTCGTCTGCGCGGTGGCCA 929 Score = 152 bits (168), Expect = 6e-32 Identities = 165/218 (76%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| ||||||||||| || || || ||||| ||||| Sbjct 134 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 193 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | || | ||||| || || |||||||||||||| || || || |||||| Sbjct 194 GACACCATCGACAACGTCAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 253 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||| | || || || | ||||| ||| Sbjct 254 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAT 313 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| || || || || || | ||||||| Sbjct 314 ATCCAGAAGGAGTCGACGCTCCACCTCG--GTGCGTCT 349 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| ||||||||||| || ||||| || || ||||| |||||||| | ||||| Sbjct 577 ATCCCTCCCGACCAGCAGCGCCTCATTTTCGCGGGCAAGCAGCTCGAGGACGGGCGTACG 636 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || | ||||| || |||| ||||| ||||| || || || ||| |||| || ||||| Sbjct 637 CTCTCGGACTACAACATCCAGAAGGAGTCCACCCTACACCTCGTCCTGCGCCTGCGCGGC 696 Query 27631 GG 27632 || Sbjct 697 GG 698 Score = 93.3 bits (102), Expect = 5e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || || ||||| ||||| | Sbjct 418 ATGCAAATCTTCGTCAAGACCCTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCGAGC 477 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||||| || ||||||||||||||||| Sbjct 478 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGG 521 >seq230 Length=49901 Score = 165 bits (182), Expect = 9e-36 Identities = 168/218 (77%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || |||||||| ||||||||||| || || || ||||| ||||| | Sbjct 21665 ATGCAAATCTTCGTGAAGACGCTGACCGGCAAGACCATCACCCTCGAGGTCGAGTCGAGC 21724 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||||||||||||||| || || ||||||||| Sbjct 21725 GACACGATCGACAACGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCGCCAGACCAG 21784 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || ||||| || ||||| |||||||| | |||||||| | ||||| || Sbjct 21785 CAGCGCCTTATCTTTGCGGGCAAGCAGCTCGAGGACGGCCGTACCCTTTCGGACTACAAC 21844 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 |||| ||||| || || || || || | ||||||| Sbjct 21845 ATCCAGAAGGAGTCGACGCTCCACCTCG--GTGCGTCT 21880 Score = 158 bits (174), Expect = 1e-33 Identities = 173/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||| | || |||||||| || || || ||||| ||||| Sbjct 22510 ATGCAGATCTTCGTCAAGACGTTGACGGGCAAGACGATCACGCTCGAGGTCGAGTCCTCG 22569 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || || |||||||||||||| || || ||||||||| Sbjct 22570 GACACGATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCAGACCAG 22629 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| || || || || || ||||| |||||||| | || ||||| | ||||| || Sbjct 22630 CAGCGCCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 22689 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 |||| ||||| || ||||| || || ||| | ||||| ||||| || || Sbjct 22690 ATCCAGAAGGAGTCGACTCTGCACCTTGTCCTCCGTCTGCGCGGCGGCCA 22739 Score = 89.7 bits (98), Expect = 6e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || ||||| ||||||||||| || || || || || ||||| |||||||| | ||||| Sbjct 22387 ATCCCTCCCGACCAGCAGCGCCTCATCTTCGCGGGCAAGCAGCTCGAGGACGGGCGTACG 22446 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || ||||||| || |||| ||||| || || || || || ||| |||| || ||||| Sbjct 22447 CTCTCAGACTACAACATCCAGAAGGAGTCGACCCTGCACCTCGTCCTGCGCCTCCGCGGC 22506 Query 27631 GG 27632 || Sbjct 22507 GG 22508 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 21946 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTGGAGTCCTCG 22005 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||||| || ||||||||||||||||| Sbjct 22006 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGG 22049 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || || ||||| ||||| Sbjct 22228 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACGCTCGAGGTGGAGTCCTCG 22287 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | || ||||||| || ||||||||||||||||| Sbjct 22288 GACACCATCGACAACGTGAAGGCGAAGATTCAGGACAAGGAGGG 22331 >seq1375 Length=30983 Score = 163 bits (180), Expect = 3e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||||||||| ||||||||||| || || | || || ||||| Sbjct 15703 ATGCAGATCTTCGTCAAGACGCTCACCGGCAAGACCATCACGTTGGAAGTCGAGTCCTCG 15644 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| || ||||||| || || |||||||| ||||| || || ||||||||| Sbjct 15643 GACACCATTGACAACGTGAAGGCGAAGATCCAGGACAAAGAGGGTATCCCGCCAGACCAG 15584 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || || || || ||||| |||||||||| ||| || || | || || || Sbjct 15583 CAGCGTTTGATCTTCGCGGGCAAGCAGCTCGAGGATGGTCGCACTCTTTCGGATTACAAC 15524 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || ||||| || || ||| | ||||| || ||||| || Sbjct 15523 ATTCAGAAGGAGTCGACTCTCCACCTCGTCCTCCGTCTCCGTGGTGGCCA 15474 Score = 161 bits (178), Expect = 1e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || || |||||||| || || |||||||| ||||| | Sbjct 15931 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACGCTTGAGGTCGAGTCGAGC 15872 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||||| || || ||||| |||||||| || ||||| |||||| Sbjct 15871 GACACTATCGACAATGTCAAGGCGAAGATCCAGGATAAGGAGGGCATCCCTCCCGACCAG 15812 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || || || || ||||| |||||||| | || || || | ||||| || Sbjct 15811 CAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 15752 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| ||||| || || || ||| | ||||| ||||| || Sbjct 15751 ATTCAGAAGGAGTCCACCCTGCACCTCGTCCTCCGTCTCCGCGGCGG 15705 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || |||||||| || || || ||||||||||| Sbjct 16212 ATGCAAATCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTCGAGGTTGAGTCCTCG 16153 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 || | ||| | ||| | ||||| || || |||||||||||||| Sbjct 16152 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGG 16109 >seq4264 Length=4713 Score = 152 bits (168), Expect = 6e-32 Identities = 319/463 (69%), Gaps = 23/463 (5%) Strand=Plus/Plus Query 80588 ACGTCTCGTACGGGCCCTCCGTCTTGGCCAGCTCACAC---GACTC-CATAAGGGCCGCG 80643 ||||||||||||| ||||| ||| |||| |||||||| | ||| || || ||| Sbjct 2090 ACGTCTCGTACGGACCCTCGGTCATGGCGAGCTCACAGCTAGCCTCGCAC----GCGGCG 2145 Query 80644 TGATAAATGCACTCAAAGACGCCCTTGTTCACACCGCG-CGCCTGTGGGTCGTCGAACGA 80702 ||||| || ||| |||| | ||||||| | | || ||||| || ||||| | Sbjct 2146 TGATACATCGTCTCGAAGATGTCCTTGTTGAG-CTGCTTCGCCTCGGGTGACTCGAAGGG 2204 Query 80703 CAAGCCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTG 80762 |||| || | |||||| |||| || || ||||| ||||||| ||||||||||||| Sbjct 2205 GAAGCGCAGCGCCATGAATGCGTCGGCGAGACCCTGGCAGCCGATGCCGATCGGGCGGTG 2264 Query 80763 GCGCTTGTTCGATCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTT 80822 |||| ||||||| |||| ||||||||| || || || |||| || ||||||| ||||| Sbjct 2265 GCGCATGTTCGAGCGCTTGGCCTCCGGGATAGGATAGTAGTTCTTGTCGATGATCCGGTT 2324 Query 80823 CAGGTTGCGTGTAACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAA---TTGGTT 80879 || ||| | || ||| || | ||||| ||| |||| ||| ||| Sbjct 2325 CAAGTTCACCGCAAGGACCTTCACGACCTTGTGAAGCATCTCGAAGTTGAACACACCGTT 2384 Query 80880 CCCCTTC-ACAAATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAG 80938 ||| | ||| | || || | ||| |||| ||||| ||||| || |||| Sbjct 2385 ----TTCGATAAAGGTGGGCAGCGCGATGGAGCCCAGGTTGCAAACGGCGGTTTCGTCAG 2440 Query 80939 CATCTGTAAACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTT 80998 | |||| | ||| |||||||||| || || ||||| || || |||| ||| | Sbjct 2441 GCGAAGAGTACTCCATGATCTCCGTGCACAGGTTGGACGACTTGATCGTCCCCAAGTTCT 2500 Query 80999 TCTGGTTTGACTTGGCGTTGCAAGCGTCCTTGT-AGCACATGT 81040 |||||| |||||||| ||| |||| | | || ||||||||| Sbjct 2501 GCTGGTTGGACTTGGC--TGC-AGCG-CATGGTCAGCACATGT 2539 >seq2737 Length=8053 Score = 114 bits (126), Expect = 1e-20 Identities = 215/321 (67%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 24585 GAGGTCTATAACCTAGGTGCCCAGTCACACGTCAAGCTGTCGTTTGACCAACCCGAGTAC 24644 |||||||| ||||| ||||| ||||| || |||||| | ||||| || |||||||| Sbjct 678 GAGGTCTACAACCTCGGTGCGCAGTCGCATGTCAAGGTCTCGTTCGAGATGGCCGAGTAC 619 Query 24645 ACGGCCAACGTGGATGCTCTAGGCACCCTAAGAATTCTTGAAGCAATTCGCNNNNNNNNN 24704 || | | | || |||| || ||||| || | | || || || || || Sbjct 618 ACCGGCGATGTCGATGGCCTCGGCACACTCCGCTTGCTCGATGCGATCCGGACGTGCGGT 559 Query 24705 NNNNNNTTGAAATTCAGATTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAG 24764 | | | | || || ||||| || |||| | | |||||||| Sbjct 558 CTCCAGAAGCACGTGCGCTTCTACCAGGCATCGACCTCTGAGCTTTACGGCAAGGTCGTT 499 Query 24765 GAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAG 24824 ||||| |||||||||||||| || || || || ||||| ||||| || ||| | ||| Sbjct 498 GAGACACCACAGTCGGAGACGACGCCGTTCTACCCGCGCTCGCCGTACGGTGTCGCCAAG 439 Query 24825 GTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAAC 24884 | | ||||| |||||| | |||||||| ||||| | || || || ||||||||| Sbjct 438 CTCTACGCGTTCTGGATCGTCGTCAACTACCGCGAGGCGTACGGCATGTACGCATGCAAC 379 Query 24885 GGAATTCTGTTCAACCATGAG 24905 || || ||||||||||| ||| Sbjct 378 GGCATCCTGTTCAACCACGAG 358 >seq523 Length=1154 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTCG---TCGTTTGGTCAGCGTCTC 64722 |||||||| ||||| || |||||| || | | | ||||| || |||| ||| Sbjct 655 AAGGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTC 714 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | || || ||| || || || || ||||| || || || ||| || || |||||| Sbjct 715 GTTGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCGTCCATCTTCTGG 774 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 || || ||||| || || ||||| || || | || || |||||||| ||||| || ||| Sbjct 775 CTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGAC 834 Query 64843 GAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG 64890 ||||| | ||| || ||||| ||| ||||||||||||||| Sbjct 835 GAGGGCATGCACACGGACTTTGCCTGCCTCCTCTTCAGCCACCTCAAG 882 >seq522 Length=1154 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/228 (70%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 64666 AAGGCTGAATGGGCCATCCGGTGGATGAATCGTGGGTCG---TCGTTTGGTCAGCGTCTC 64722 |||||||| ||||| || |||||| || | | | ||||| || |||| ||| Sbjct 655 AAGGCTGAGTGGGCGCTCACGTGGATCAACGACGAGCAGAGCTCGTTCGGCGAGCGCCTC 714 Query 64723 GCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGG 64782 | || || ||| || || || || ||||| || || || ||| || || |||||| Sbjct 715 GTTGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCGGGCTCGTTCGCCTCCATCTTCTGG 774 Query 64783 CTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGAC 64842 || || ||||| || || ||||| || || | || || |||||||| ||||| || ||| Sbjct 775 CTCAAGAAGCGCGGACTCATGCCCGGCCTCACCTTCTCCAACGAGCTCATCTCGCGCGAC 834 Query 64843 GAGGGGCTCCACCAAGAATTTGCGGTTACCCTGTTCAGCCACCTCAAG 64890 ||||| | ||| || ||||| ||| ||||||||||||||| Sbjct 835 GAGGGCATGCACACGGACTTTGCCTGCCTCCTCTTCAGCCACCTCAAG 882 >seq473 Length=15333 Score = 95.1 bits (104), Expect = 1e-14 Identities = 239/361 (66%), Gaps = 2/361 (1%) Strand=Plus/Minus Query 31146 CCAGGTCGAGAAGGAGCTCAAGAAAACAGATGGGTCCAAAAAGTCTCGAATTACGGGAAT 31205 ||||| ||| |||||| ||||||| || || || | ||| | || | | || | Sbjct 3391 CCAGGCCGATAAGGAGATCAAGAAGACGGACGGCACGAAACGCACCCGTCTGAGCGGTCT 3332 Query 31206 TCCGAAGCTCGACGACGCCAACTGGGCCGGTACCCACAAGTCGCACGAGTGCACGCTTAT 31265 ||| || || ||||| ||| || || | | | || || | || |||||||| || Sbjct 3331 TCCCAAACTGTCGGACGCGAACAACGCAGGGAGCAAGAACGCGAAAGACTGCACGCTCAT 3272 Query 31266 TATTACCGAGGGTGACTCGGCAAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCG 31325 | ||||||||||| ||||| ||| ||||||| ||||| || | | || || || || Sbjct 3271 CCTAACCGAGGGTGATTCGGCCAAGACGCTTGCGATTGCCGGACTCGGCGTCGTCGGTCG 3212 Query 31326 CAATGCGTTCGGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGT 31385 | | ||||| ||||| || || || ||||||| | |||||||| || ||| Sbjct 3211 CGACAACTTCGGCGTGTTCCCACTGCGTGGCAAGCTCCTCAACGTTCGCGAGGCCAAGCA 3152 Query 31386 TAAACAGGTTACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCA 31445 | | ||| | | | | || |||||| | ||| | || |||||| | || || ||| Sbjct 3151 TGACCAGATCATGAAGAACGAAGAGATCCAGAACATCAAGAAGATCATGGGTCTCGTGCA 3092 Query 31446 TGGCAAGGTATA-TAATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCG 31504 ||||| || | ||| || ||||| || ||||| |||||||| ||||| | Sbjct 3091 CAACAAGGAGTACTCGAACACCTCCAG-CTTGCGCTATGGTCGTCTCATGATCATGACGG 3033 Query 31505 A 31505 | Sbjct 3032 A 3032 Score = 84.2 bits (92), Expect = 2e-11 Identities = 105/144 (73%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 30328 GGAATTCCCATTAAGAAACACCCTACCGAAAAAATCTGGATCCCCGAACTCATTTTTGGG 30387 || ||||| ||| ||| ||| | | || || |||| ||||| || | || || || Sbjct 4351 GGTATTCCTATTGAGATGCACTCGAAAGAGAAGATCTACATCCCAGAGATGATCTTCGGT 4292 Query 30388 CACCTTTTGACAAGCTCCAACTACAACGACGAGGAGCAGCGCGTGACGGGTGGACGAAAT 30447 |||||| | | ||| |||||| ||||||| ||| || |||| ||||| || || Sbjct 4291 CACCTTCTCTCGTCCTCTAACTACGACGACGACGAGAAGAAGCTGACCGGTGGTCGTAAC 4232 Query 30448 GGCTACGGTGCAAAGCTCGCCAAC 30471 || ||||||||||||||||||||| Sbjct 4231 GGTTACGGTGCAAAGCTCGCCAAC 4208 >seq1288 Length=8444 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || ||||||||||| || || || || || ||||| |||||||| | || ||| Sbjct 426 ATCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACC 485 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| ||||| || |||||||||| || || || || || ||| |||| || ||||| Sbjct 486 CTCAGC-GACTACAACATCCAAAAGGAGTCGACGCTCCACCTCGTCCTGCGCCTGCGCGG 544 Query 27630 TGG 27632 || Sbjct 545 AGG 547 >seq1287 Length=7882 Score = 84.2 bits (92), Expect = 2e-11 Identities = 94/123 (76%), Gaps = 2/123 (2%) Strand=Plus/Plus Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 || || || ||||||||||| || || || || || ||||| |||||||| | || ||| Sbjct 427 ATCCCGCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACC 486 Query 27571 CT-AGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 || ||| ||||| || |||||||||| || || || || || ||| |||| || ||||| Sbjct 487 CTCAGC-GACTACAACATCCAAAAGGAGTCGACGCTCCACCTCGTCCTGCGCCTGCGCGG 545 Query 27630 TGG 27632 || Sbjct 546 AGG 548 >seq1091 Length=5350 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 24765 GAGACGCCACAGTCGGAGACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAG 24824 ||||| || ||||| ||||| || || || || || || ||||| || ||| | || Sbjct 4532 GAGACACCGCAGTCCGAGACTACGCCGTTCTACCCCCGCTCGCCGTACGGTGTCGCCAAA 4473 Query 24825 GTGTTCGCGTACTGGATAACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAAC 24884 | | ||| |||||||| | | |||||||||||| | || || || ||||||||| Sbjct 4472 CTCTACGCATACTGGATCGTCGTCAGCTACCGTGAGGCGTACGGCATGTACGCATGCAAC 4413 Query 24885 GGAATTCTGTTCAACCATGA 24904 || || ||||||||||| || Sbjct 4412 GGCATCCTGTTCAACCACGA 4393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570247031385680