Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07- 25] 8,889 sequences; 36,136,062 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq522 91.5 1e-13 >seq522 Length=1154 Score = 91.5 bits (100), Expect = 1e-13 Identities = 348/541 (64%), Gaps = 19/541 (4%) Strand=Plus/Minus Query 4563 TGCAAACCTTCGTCTCTGCTA-ATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACC 4621 |||| || ||||| | || | || || ||||| || || || | |||||||| | || Sbjct 845 TGCATGCCCTCGTCGC-GCGAGATGAGCTCGTTGGAGAAGGTGAGGCCGGGCATGAGTCC 787 Query 4622 TCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGC 4681 | ||| || ||||| || || | ||| || || || || ||||| ||||| || ||||| Sbjct 786 GCGCTTCTTGAGCCAGAAGATGGAGGCGAACGAGCCCGAGAAGAAGATGCCCTCGACGGC 727 Query 4682 GGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 ||| ||||| || | || ||||||||||| | ||| || ||||| | | || Sbjct 726 GGCGAACGCAACGAGGCGCTCGCCGAACGAGCTCTGCTCGTCGTTGATCCACGTGAGCGC 667 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAA---TAATTTACT 4798 ||| | ||| || ||| ||||| || || || | || || | || || | | Sbjct 666 CCACTCAGCCTTGCGCTTCACGCAGGGGATGGTCTCGATCGCATCGAAGAGGAACTCGCG 607 Query 4799 TTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTAT 4858 | | || || | ||| || ||||| || || || || | ||||| || || Sbjct 606 CTGCGC---CGGCTCCTTAATGTATGTGTCGATGAGGAGCGAGTAGGTCTCAGAGTGGAT 550 Query 4859 ATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTT 4918 || || || |||||| || ||||| ||||| | ||||| | | || || ||| Sbjct 549 GTTCTCCATCATAATCTGGAAGCCGTAGAAGCAGCGCGCTTCAGCGATCTGCACCTCGCC 490 Query 4919 ACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAA 4978 | || | ||| | | ||| ||||| || || ||||| ||| || || || || | Sbjct 489 CGAGAAGCGTTCGAGCAGGTTCTCGTTGACGATGCCGTCCGAGGCAGCGAAGAAGGCAAG 430 Query 4979 AACATGAGATATAAAGT-AC------TGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031 || || || || |||| || ||| |||||| | || |||||| | | | Sbjct 429 GACGTGCGAGATGAAGTGACGCTCGTTGTCGTTCAGGC----GGTTGCTCCAGTCGTGGA 374 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 || || | | || | || || ||||||| ||||| || || || || ||||||| Sbjct 373 TGTCCTTGGACAGGTCCATCTCCTCGGCAGTCCAGAACGAGGCCTCAGCCTTCTTGTACA 314 Query 5092 T 5092 | Sbjct 313 T 313 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427003335715037