Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq231 185 2e-41
seq230 179 8e-40
seq1375 158 3e-33
seq464 107 4e-18
seq1288 98.7 2e-15
seq1287 98.7 2e-15
seq473 93.3 9e-14
>seq231
Length=27061
Score = 185 bits (204), Expect = 2e-41
Identities = 177/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
||||| ||||| ||||| || || || | || || || ||||||||||| || | |
Sbjct 926 CCACCGCGCAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGAA 867
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||||||||| || || || ||||| ||||| | ||| || ||||| |||
Sbjct 866 AGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGG 807
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || || | ||||| |||||||| | |||||
Sbjct 806 ATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCGATCGTGTCCGAGGACTCGACC 747
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct 746 TCCAGCGTGATCGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCAT 700
Score = 150 bits (166), Expect = 4e-31
Identities = 148/191 (77%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || ||||| |||||||| | ||| |||||||| ||||| || || || || ||||||
Sbjct 324 TCCTTCTGGATATTGTAGTCCGAAAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCAAAG 265
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | || || ||||| ||| || ||||||||||| |||||||| || || ||| |
Sbjct 264 ATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTGACGTTG 205
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| || | ||||| ||||| ||||| ||||| || |||| ||||| |||
Sbjct 204 TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTCACG 145
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 144 AAGATTTGCAT 134
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| || ||||| || || ||| | ||||| ||||| | ||||| |||
Sbjct 521 CCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCGCTCGACTCGACCTCG 462
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||||| ||||| ||||| || |||||
Sbjct 461 AGCGTGATCGTCTTGCCCGTCAGGGTCTTGACGAAGATTTGCAT 418
>seq230
Length=49901
Score = 179 bits (198), Expect = 8e-40
Identities = 176/227 (78%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| || ||||| || || || || || | || || || |||||||||||||| | |
Sbjct 22736 CCGCCGCGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 22677
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| |||||||| ||||| || || || ||||| ||||| | || || ||||| |||
Sbjct 22676 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGG 22617
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|| ||||||||||| |||||||| || || ||| | ||||| |||||||| | |||||
Sbjct 22616 ATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACC 22557
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
||||| ||||||||||| |||||||| ||||| ||||| ||||||||
Sbjct 22556 TCGAGCGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCAT 22510
Score = 138 bits (152), Expect = 2e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | ||| || ||||| ||||| || || || || ||||||
Sbjct 21855 TCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCAAAG 21796
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | || || ||||| ||| || ||||||||||| || ||||| || || ||| |
Sbjct 21795 ATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACGTTG 21736
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
||||| ||||| | ||||| ||||| ||||| ||||| || |||| ||||| |||
Sbjct 21735 TCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCTTGCCGGTCAGCGTCTTCACG 21676
Query 283089 AATATCTGCAT 283099
|| || |||||
Sbjct 21675 AAGATTTGCAT 21665
Score = 93.3 bits (102), Expect = 9e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| || ||||| || || ||| | ||||| |||||||| | || || |||
Sbjct 22049 CCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCG 21990
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 21989 AGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 21946
Score = 93.3 bits (102), Expect = 9e-14
Identities = 83/104 (80%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| || ||||| || || ||| | ||||| |||||||| | || || |||
Sbjct 22331 CCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCG 22272
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| ||||| | ||||| ||||| ||||||||
Sbjct 22271 AGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22228
>seq1375
Length=30983
Score = 158 bits (174), Expect = 3e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|||||||| || || || || || || | || || || || |||||||| || | |
Sbjct 15477 CCACCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGAA 15536
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| ||||| |||||||| || || || || || ||||||||||| || ||||| |||
Sbjct 15537 AGAGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGGG 15596
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
|||||||| ||||| |||||||| || || ||| | || || |||||||| | ||||||
Sbjct 15597 ATACCCTCTTTGTCCTGGATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGGACTCGACT 15656
Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| | ||||| ||||| || || | ||||| ||||| ||||||||
Sbjct 15657 TCCAACGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 15703
Score = 145 bits (160), Expect = 2e-29
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||| || || || || || || || || | ||| || || || ||||||||||| |
Sbjct 15704 ACCGCCGCGGAGACGGAGGACGAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGA 15763
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| |||||||| ||||| || || || ||||| ||||| | ||| || ||||| ||
Sbjct 15764 AAGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGG 15823
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051
|| |||||||| || |||||||| || || || | ||||||||||| | |||||
Sbjct 15824 GATGCCCTCCTTATCCTGGATCTTCGCCTTGACATTGTCGATAGTGTCGCTCGACTCGAC 15883
Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| || ||||||||||| ||||| | ||||| ||||| ||||||||
Sbjct 15884 CTCAAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 15931
Score = 89.7 bits (98), Expect = 1e-12
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| || || || | ||||| |||||||| | || || |||
Sbjct 16109 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCG 16168
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||| ||||| ||||| | ||||| ||||| || |||||
Sbjct 16169 AGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATTTGCAT 16212
>seq464
Length=19301
Score = 107 bits (118), Expect = 4e-18
Identities = 86/104 (83%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| || || ||| | ||||| |||||||||| || || |||
Sbjct 3772 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCCGAAGACTCCACCTCG 3831
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099
|| ||||||||||| ||||| | ||||| ||||| ||||||||
Sbjct 3832 AGGGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 3875
>seq1288
Length=8444
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| || || || | ||||| |||||||| | ||||| |||
Sbjct 366 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCG 307
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| ||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 306 AGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATCTT 260
>seq1287
Length=7882
Score = 98.7 bits (108), Expect = 2e-15
Identities = 86/107 (80%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055
||||||||||| |||||||| || || || | ||||| |||||||| | ||||| |||
Sbjct 366 CCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCG 307
Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102
|| ||||| ||||| ||||| | ||||| ||||| |||||||| ||
Sbjct 306 AGGGTGATGGTCTTGCCCGTAAGGGTCTTCACGAAGATCTGCATCTT 260
>seq473
Length=15333
Score = 93.3 bits (102), Expect = 9e-14
Identities = 130/182 (71%), Gaps = 8/182 (4%)
Strand=Plus/Plus
Query 273801 GCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGACCCTCGGGCAGTAGCCAGTTT 273860
|| ||||| |||||||| || | || || |||| || | ||||| ||| ||||
Sbjct 1996 GCGTGGTCTTTGCCACCCTGGTCACGCGTGCCGTACTGGCCGTTGGGCATAAGCAAGTTC 2055
Query 273861 ATGTTGTTGCTACCGACGTAATCCTGAGCCATATTCACGATAGTCCCCTGAAGGGATAC- 273919
| ||||||||| |||||||| || || |||| || || |||||| || || ||
Sbjct 2056 AGGTTGTTGCTGCCGACGTAGTCTTGGGCCAAGTTGACAATAGTCAT----AGCGAGACT 2111
Query 273920 ---CTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAACCACTGAACTGAGCAACCTT 273976
||||||||| || || ||| || |||||||| || ||| ||| |||||||||||
Sbjct 2112 CTGCTCGCCGTGATGGTACGCGGCTTGCTCGGCGATGTATCCAATGAGCTGAGCAACCTG 2171
Query 273977 CA 273978
||
Sbjct 2172 CA 2173
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046619986545406
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