Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_032255.1
Length=112536
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 138 8e-28
seq231 134 1e-26
seq230 118 8e-22
seq1288 82.4 5e-11
seq1287 82.4 5e-11
>seq1375
Length=30983
Score = 138 bits (152), Expect = 8e-28
Identities = 159/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || ||| |||||| || |||||||| || | || ||| |||| ||
Sbjct 15723 ACGAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAAAGAGTGCGGCCGTCCTCG 15782
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | ||||||||| || | ||| | || ||||| |||
Sbjct 15783 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGG 15842
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | || |||||| || || ||||| | ||| |||||||
Sbjct 15843 ATCTTCGCCTTGACATTGT--CGATAGTGTCGCTCGACTCGACCTCAAGCGTGATCGTCT 15900
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| |||||||||||||| |||||||| ||||||
Sbjct 15901 TGCCCGTGAGGGTCTTGACGAAGATCTGCATG 15932
Score = 134 bits (148), Expect = 1e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| || ||||||||||| | || ||| | || ||
Sbjct 15495 ACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGAAAGAGTGCGACCATCCTCG 15554
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| || || ||||||||||||||||| |||| || | ||| || || |||
Sbjct 15555 AGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGGGATACCCTCTTTGTCCTGG 15614
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
|||||| ||||| | | |||||||| | ||| || || |||| ||| || |||||
Sbjct 15615 ATCTTCGCCTTCACGTTGTCAATGGTGTCCGAGGACTCGACTTCCAACGTGATGGTCTTG 15674
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
|| ||||| ||||| |||||||| |||||
Sbjct 15675 CCGGTGAGCGTCTTGACGAAGATCTGCAT 15703
>seq231
Length=27061
Score = 134 bits (148), Expect = 1e-26
Identities = 158/212 (75%), Gaps = 4/212 (2%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| |||||||||||||| | || ||| | || ||
Sbjct 908 ACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGGCCATCCTCG 849
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | ||||||||| |||| || | || ||||| |||
Sbjct 848 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 789
Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| || ||| | || ||||| | ||| || ||||||| ||| |||||||
Sbjct 788 ATCTTCGCCTTGACATTGT--CGATCGTGTCCGAGGACTCGACCTCCAGCGTGATCGTCT 731
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
| ||||| | ||||| |||||||| ||||||
Sbjct 730 TGCCCGTCAATGTCTTGACGAAGATCTGCATG 699
Score = 125 bits (138), Expect = 5e-24
Identities = 158/216 (73%), Gaps = 1/216 (0%)
Strand=Plus/Minus
Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186
|||| ||||| ||||| |||||| ||||| ||||| || | || ||| |||| |
Sbjct 344 CACCGAGGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGGCCGTCCT 285
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||| || |||||||| | |||||||| || | || | || ||||| |||
Sbjct 284 CGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCT 225
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
|||||| ||| | | | |||||||||| || || ||||| | || || ||||
Sbjct 224 GGATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCT 165
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGT 44342
| || || || ||||||||||||||||||||| |||
Sbjct 164 TGCCGGTCAGCGTCTTCACGAAGATTTGCATGGTGT 129
>seq230
Length=49901
Score = 118 bits (130), Expect = 8e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188
|| ||||| || || |||||| ||||||||||| || | || ||| |||| ||
Sbjct 22718 ACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 22659
Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248
|||||||| ||||| ||||| | |||||||| |||| || | || ||||| |||
Sbjct 22658 AGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCTGG 22599
Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308
||||| ||| | | | || ||||| | ||| || ||||| | ||| ||||||||
Sbjct 22598 ATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGACCTCGAGCGTGATCGTCTTG 22539
Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338
||||| | ||||| |||||||| ||||||
Sbjct 22538 CCCGTCAACGTCTTGACGAAGATCTGCATG 22509
Score = 114 bits (126), Expect = 9e-21
Identities = 155/215 (72%), Gaps = 1/215 (0%)
Strand=Plus/Minus
Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186
|||| ||||| ||||| |||||| ||||||||||| || | || || |||| |
Sbjct 21875 CACCGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCT 21816
Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246
| |||||||| || |||||||| | |||||||| |||| || | || ||||| |||
Sbjct 21815 CGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCCT 21756
Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306
||||| ||| | | | || |||||| || || ||||| | || || ||||
Sbjct 21755 GAATCTTGGCCTTGACGTTGTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTCT 21696
Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341
| || || || ||||||||||||||||||||| ||
Sbjct 21695 TGCCGGTCAGCGTCTTCACGAAGATTTGCATGGTG 21661
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCC 44293
|| ||||| ||| |||||| ||||| | | |||||||| | ||| ||||||||
Sbjct 22049 CCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCG 21990
Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || ||||| |||||||||||||| |||||||| |||||
Sbjct 21989 AGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 21946
Score = 84.2 bits (92), Expect = 2e-11
Identities = 81/104 (78%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCC 44293
|| ||||| ||| |||||| ||||| | | |||||||| | ||| ||||||||
Sbjct 22331 CCCTCCTTGTCCTGAATCTTCGCCTTCACGTTGTCGATGGTGTCCGAGGACTCCACCTCG 22272
Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337
| ||| || ||||| |||||||||||||| |||||||| |||||
Sbjct 22271 AGCGTGATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 22228
>seq1288
Length=8444
Score = 82.4 bits (90), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || || ||||| ||||| |||||||||||||||||| ||| |
Sbjct 547 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 488
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| ||| |||| || |||||||| ||||| ||||||| |||||||| ||
Sbjct 487 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 435
>seq1287
Length=7882
Score = 82.4 bits (90), Expect = 5e-11
Identities = 86/113 (76%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170
|| || | ||| | || || ||||| ||||| |||||||||||||||||| ||| |
Sbjct 548 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 489
Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223
|| ||| |||| || |||||||| ||||| ||||||| |||||||| ||
Sbjct 488 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTC 436
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 359951400552513
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |