Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Limonomyces_20culmigenus_20[genbank_20GCA_5F002233555.1_202017-07-
25] 8,889 sequences; 36,136,062 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq1375 176 4e-39
seq230 168 6e-37
seq231 145 7e-30
seq1288 107 2e-18
seq1287 107 2e-18
seq464 95.1 1e-14
>seq1375
Length=30983
Score = 176 bits (194), Expect = 4e-39
Identities = 178/230 (77%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|||||||| ||||| | || || ||||| ||| ||||||||||||||| ||||| ||
Sbjct 15705 CCGCCGCGGAGACGGAGGACGAGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCCGAA 15764
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||||||||| |||||||| || || ||||| ||||| | ||
Sbjct 15765 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGG 15824
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||| ||| ||| || ||| || | || | ||||||||||||||| |
Sbjct 15825 ATGCCCTCCTTATCCTGGATCTTCGCCTTGACATTGTCG--ATAGTGTCGCTCGACTCGA 15882
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | ||| ||||| || ||||| || ||||| ||||| |||||||||
Sbjct 15883 CCTCAAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 15932
Score = 125 bits (138), Expect = 7e-24
Identities = 170/231 (74%), Gaps = 6/231 (3%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| || || ||||| | || || || || || ||||||||||||||| || || ||
Sbjct 15476 GCCACCACGGAGACGGAGGACGAGGTGGAGAGTCGACTCCTTCTGAATGTTGTAATCCGA 15535
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753
|| ||||| | || |||||||||||||| ||||| |||| ||||| ||||| ||||
Sbjct 15536 AAGAGTGCGACCATCCTCGAGCTGCTTGCCCGCGAAGATCAAACGCTGCTGGTCTGGCGG 15595
Query 41754 GA-ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTC 41811
|| || |||| |||||| ||| || |||| ||| | | | ||||| |||||
Sbjct 15596 GATACCCTCT--TTGTCCTGGATCTTCGCCTTC-ACGTTGTCAATGGTGTCCGAGGACTC 15652
Query 41812 CACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| |||| ||| || || || || || |||||||| ||||| ||||||||
Sbjct 15653 GACTTCCAACGTGATGGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCAT 15703
Score = 113 bits (124), Expect = 4e-20
Identities = 99/122 (81%), Gaps = 1/122 (1%)
Strand=Plus/Plus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | ||| || || ||||| ||||||||| ||||| ||||||||
Sbjct 15932 GCCGCCGCGCAGGCGGAGCACGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGA 15991
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGG 41753
||| || || | || |||||||||||||| ||||| ||||||||||| ||||| ||||
Sbjct 15992 GAGAGTACGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGCGG 16051
Query 41754 GA 41755
||
Sbjct 16052 GA 16053
>seq230
Length=49901
Score = 168 bits (186), Expect = 6e-37
Identities = 177/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| ||||| | || || ||||| || ||||||||| ||||| ||||| ||
Sbjct 22737 GCCGCCGCGCAGACGGAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGA 22678
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| |||| |||||||||||||||||||| || |||||||| ||||| | ||
Sbjct 22677 AAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGCGG 22618
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813
| || |||||||||| || | || || | ||| | | | ||||| ||||| |
Sbjct 22617 GATGCCCTCCTTGTCC-TGGATCTTGGCCTTGACGTTGTCGATCGTGTCCGAGGACTCGA 22559
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | ||| ||||| || ||||||| |||||| ||||| |||||||||
Sbjct 22558 CCTCGAGCGTGATCGTCTTGCCCGTCAACGTCTTGACGAAGATCTGCATG 22509
Score = 149 bits (164), Expect = 6e-31
Identities = 163/213 (77%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711
|||| || || ||||| ||||||||| ||||| ||||| || ||||| || |||| |
Sbjct 21875 CACCGAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTACGGCCGTCCT 21816
Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771
||||||||||||| || || || |||||||| ||||| | || | || ||||||||||
Sbjct 21815 CGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCTGGCGGGATGCCCTCCTTGTCC- 21757
Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
||| | || || | ||| | | | |||||||||||||| ||||| | || || ||
Sbjct 21756 TGAATCTTGGCCTTGACGTTGTCGATCGTGTCGCTCGACTCGACCTCGAGGGTGATGGTC 21697
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || ||||||||||| ||||| || ||||||
Sbjct 21696 TTGCCGGTCAGCGTCTTCACGAAGATTTGCATG 21664
Score = 107 bits (118), Expect = 2e-18
Identities = 92/114 (81%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | || || ||||| || ||||||||| ||||| ||||| ||
Sbjct 22509 GCCGCCGCGGAGGCGCAGGACGAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCTGA 22450
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
||| || ||| |||| |||||||||||||| ||||| || |||||||| |||||
Sbjct 22449 GAGCGTACGCCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 22396
Score = 105 bits (116), Expect = 6e-18
Identities = 91/113 (81%), Gaps = 0/113 (0%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || || || | |||||| ||||| || ||||||||| ||||| ||||| ||
Sbjct 22226 CCACCACGGAGGCGGAGCACCAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 22167
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
|||||||| |||| |||||||||||||| ||||| || |||||||| |||||
Sbjct 22166 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATGAGGCGCTGCTGGTC 22114
>seq231
Length=27061
Score = 145 bits (160), Expect = 7e-30
Identities = 172/231 (74%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||| ||||| ||||| | || || ||||| || ||||||||| ||||| || || ||
Sbjct 927 GCCACCGCGCAGACGAAGGACAAGGTGCAGAGTCGACTCCTTCTGGATGTTGTAATCCGA 868
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
|||||||| | || ||||||||||| |||||||| || || ||||| ||||| | ||
Sbjct 867 AAGGGTGCGGCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCTGGCGG 808
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812
| || |||||||||| ||| || ||| || | || | ||||| |||||
Sbjct 807 GATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCG--ATCGTGTCCGAGGACTCG 750
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| ||| ||||| || ||||||| ||||| ||||| |||||||||
Sbjct 749 ACCTCCAGCGTGATCGTCTTGCCCGTCAATGTCTTGACGAAGATCTGCATG 699
Score = 131 bits (144), Expect = 2e-25
Identities = 159/213 (75%), Gaps = 3/213 (1%)
Strand=Plus/Minus
Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711
|||| || || ||||| ||||||||| || || ||||| || || ||||| |||| |
Sbjct 344 CACCGAGGTGGAGCGTCGACTCCTTCTGGATATTGTAGTCCGAAAGAGTGCGGCCGTCCT 285
Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771
||||||||||||| || || || |||||||| ||||| | || | || ||||||||||
Sbjct 284 CGAGCTGCTTGCCCGCAAAGATAAGGCGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCC- 226
Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830
|| | || || | ||| | | | |||||| |||||| ||||| | || || ||
Sbjct 225 TGGATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 166
Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|| || ||||||||||| ||||| || ||||||
Sbjct 165 TTGCCGGTCAGCGTCTTCACGAAGATTTGCATG 133
Score = 107 bits (118), Expect = 2e-18
Identities = 92/114 (81%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
||||||||| || || | || || || || ||| ||||||||| ||||| ||||| ||
Sbjct 699 GCCGCCGCGCAGGCGCAGGACGAGGTGTAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 640
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC 41748
||| || ||| |||| |||||||||||||| ||||| || |||||||| |||||
Sbjct 639 GAGCGTACGCCCGTCCTCGAGCTGCTTGCCCGCGAAAATGAGGCGCTGCTGGTC 586
>seq1288
Length=8444
Score = 107 bits (118), Expect = 2e-18
Identities = 97/121 (80%), Gaps = 1/121 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || || | || || || ||||| |||||| || ||||| |||||| |
Sbjct 547 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 488
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
|||||||| |||| |||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 487 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 428
Query 41755 A 41755
|
Sbjct 427 A 427
>seq1287
Length=7882
Score = 107 bits (118), Expect = 2e-18
Identities = 97/121 (80%), Gaps = 1/121 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| ||||| || || | || || || ||||| |||||| || ||||| |||||| |
Sbjct 548 CCTCCGCGCAGGCGCAGGACGAGGTGGAGCGTCGACTCCTTTTGGATGTTGTAGTCGCTG 489
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGG 41754
|||||||| |||| |||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 488 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGG 429
Query 41755 A 41755
|
Sbjct 428 A 428
>seq464
Length=19301
Score = 95.1 bits (104), Expect = 1e-14
Identities = 84/104 (81%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 41653 CACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTC 41712
||| || || || || ||||||||| ||||| |||||||| || ||||| |||| ||
Sbjct 3602 CACGAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGAGTGCGGCCGTCCTC 3661
Query 41713 GAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTC-CGCGGGA 41755
|||||||||||| ||||| || |||||||| ||||| ||||||
Sbjct 3662 GAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGGA 3705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462252632246800
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