Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq53 196 5e-45 >seq53 Length=257799 Score = 196 bits (216), Expect = 5e-45 Identities = 380/557 (68%), Gaps = 8/557 (1%) Strand=Plus/Plus Query 16871 GTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCG 16930 ||||| || |||||| || ||||||||| |||||| || | | | || | | Sbjct 55415 GTCAAGAACTCTTGCTCAATTGTTACCGCTTCCACAATAATCCTCTCGA-TGGTGTTTGG 55473 Query 16931 GA-CGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTC 16989 | |||| || |||| ||||| | |||| || || ||||| || ||| | || || Sbjct 55474 GTGCGGTCTACGTTTGAGATGCGTGAACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTC 55533 Query 16990 GTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAA 17049 || | ||| |||||||| || |||||||| | || ||||| || || ||||| | Sbjct 55534 ATCCCGGCTAATAAGTTCATTTGAAAATGTGAGGCCAGGCATGAAACCACGCTTCTTCAT 55593 Query 17050 CCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGAT 17109 ||||||||||| ||||||||| || ||||| ||||| || || || | || || |||| Sbjct 55594 CCAAAATATCGAGGCGAACGATCCCGAAAAAAATATGCCTTCTACAGCGGCGAAGGCGAC 55653 Query 17110 TAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTT 17169 | |||||| || |||| | | |||| ||||| | | ||||||||||||| Sbjct 55654 CAGTCGTTCCGCAAACGTTGATTGCTTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTT 55713 Query 17170 TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAA---TTTCTCTTTTTCCTGTAG 17226 |||| ||| | || || || || || | ||| || || | ||| || Sbjct 55714 GCGCTTGATGGATGGAATTGTCTCAATAGCGTCAAACAAAAGAGTCCGGTCATCC---AG 55770 Query 17227 GTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGC 17286 ||| | || || ||||| ||||| ||| ||| | || ||||||| ||| || || Sbjct 55771 GTCTCTGATGTAGGTATCAATGAGCAGGGAGTAGGTCTCTGAGTGTACGTTTTCTATCAT 55830 Query 17287 TATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC 17346 |||||||| || || || || || || || || | ||||| || | | |||||||| Sbjct 55831 GATCTGAAAACCATAGAAACAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAATCGTTC 55890 Query 17347 CGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAAT 17406 | || |||||||| ||||| || ||| || ||||||||||||| | |||| ||| Sbjct 55891 AACGAGGTTTTCGTTAACGATACCATCGGAGGCAGCGAAAAACGCCAGAACATGCGAAAT 55950 Query 17407 GAAATATTTTTCGTCCG 17423 ||||||| ||||| || Sbjct 55951 GAAATATCGTTCGTTCG 55967 Score = 174 bits (192), Expect = 2e-38 Identities = 392/585 (67%), Gaps = 13/585 (2%) Strand=Plus/Minus Query 16941 GTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGA 17000 |||| ||||| | |||| || |||||||||||| ||| | ||||| || | ||| | Sbjct 57758 GTTTGAGATGGCTGAACAAGAGGCATGCGAAATCGGTATGCATGCCCTCATCACGGCTAA 57699 Query 17001 TAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCG 17060 ||||||| || |||||||| | || ||||| || ||||| || | ||||||||||| Sbjct 57698 TAAGTTCATTTGAAAATGTGAGGCCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCG 57639 Query 17061 CGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGG 17120 ||||||||| || || || ||||| || || || | || || |||| | ||||||| Sbjct 57638 AGGCGAACGATCCCGAGAAAAATATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGG 57579 Query 17121 CGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGC 17180 | |||||| || || || | |||||| | | |||| || || || | ||| |||| Sbjct 57578 CAAACGTCGAGTGTTGGTCAGAAATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGC 57519 Query 17181 AATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACG 17240 || || ||||| ||||| | ||| | | || || | || | || || | Sbjct 57518 AAGGGATGGTTTCAATGGCGTCAAACAGATATTCCCGCTCGGCAACATCCTTGATGTATG 57459 Query 17241 TATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGT 17300 | |||||||| || ||| | |||||||| ||||| ||||| ||||| || |||| Sbjct 57458 TGTCGATGAGGAGAGAATACGTCTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGT 57399 Query 17301 AAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC-CGCTAGATTTTCG 17359 |||| || || || || || | || ||||| | | || || || || || || ||| Sbjct 57398 AAAAACACCGAGCCTCGGCGACCTGGACTTCATTGGAAAAACGCTCGAGCAAG-TTCTCG 57340 Query 17360 TTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCG 17419 || || || || || ||||| || || || | | ||| ||||| | || Sbjct 57339 TTGACTATTCCATCCGAAGCGGCAAAGAAGGCGAGAACATGAGAGATGAA----GTGACG 57284 Query 17420 TCCGGTGT-AAGAACGCG------CCAGTCCTTTAAATCTTTGGATATATCCACTTCTTC 17472 || ||| | || ||| |||||| | | |||||| || | |||| ||| || Sbjct 57283 CTCGTTGTCATTAAGGCGATTGTTCCAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTC 57224 Query 17473 GGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 | ||||| || ||| | ||||| |||||||| | |||||| Sbjct 57223 TGCTGTCCAGAATGAAGCTTCGGCCTTCTTATACATCTGCCAAAT 57179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517542423563880