Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq76 107 4e-18 seq53 98.7 2e-15 >seq76 Length=175981 Score = 107 bits (118), Expect = 4e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 94825 TTAAGAGTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAG 94884 || || || ||||| || |||||||| || || | | || | | |||||| || Sbjct 106685 TTTAGTGTGTCATAGATGCCCTCAATAGAGTCGTCCTTCATGCAGACCAAGAAGCATGAA 106744 Query 94885 GAAAGTTGGGG-TGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATA 94943 |||||| || |||| ||| ||| ||| || || || || || || || || ||||| Sbjct 106745 CTAAGTTGTGGATGTGG-TGTACCAGCATTGAAGAGGGTAGGCGATGCGTGCGTGAAATA 106803 Query 94944 GTGCCTCGACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCC 95003 | | |||||||| | ||| |||||||||||| | ||||||||| || |||||||| Sbjct 106804 GCGTTCGGACATGAGGTTATAAGTTTCAATGACACGGTCGATGTCTGAACCATGAATGCC 106863 Query 95004 GACAGCCACACGCATAATCATGTCCTGAGGGCGCTC 95039 ||| || |||||||| ||||| | || || ||||| Sbjct 106864 GACGGCGACACGCATGATCATATGTTGGGGACGCTC 106899 >seq53 Length=257799 Score = 98.7 bits (108), Expect = 2e-15 Identities = 160/228 (70%), Gaps = 7/228 (3%) Strand=Plus/Minus Query 101850 CCATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGAT----GCAAAGCAAT-AACGATTT 101904 |||||||| || | |||||||| | | ||||| | ||||||| |||| || Sbjct 55724 CCATCAAGCGCAAAGCCGAGTGGGCTCTCAGGTGGATAGCGGACAAGCAATCAACGTTT- 55666 Query 101905 GGCGGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGC 101964 ||||||| | | || ||||| || || || ||||| || || ||| || | ||||| Sbjct 55665 -GCGGAACGACTGGTCGCCTTCGCCGCTGTAGAAGGCATATTTTTTTCGGGATCGTTCGC 55607 Query 101965 ATCCATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTT 102024 || || || ||||| ||||| | ||| | ||||||| ||||| | || ||||| | Sbjct 55606 CTCGATATTTTGGATGAAGAAGCGTGGTTTCATGCCTGGCCTCACATTTTCAAATGAACT 55547 Query 102025 CATTTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTT 102072 ||| |||| |||||||||||| ||||| || ||| ||||||| Sbjct 55546 TATTAGCCGGGATGAAGGTCTTCATACGGACTTCGCTTGCTTGCTGTT 55499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989577774588905