Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq53 212 9e-50 >seq53 Length=257799 Score = 212 bits (234), Expect = 9e-50 Identities = 384/558 (69%), Gaps = 8/558 (1%) Strand=Plus/Minus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 |||||||||||| |||| ||||| || | ||||| ||||| || ||||| ||||| Sbjct 57735 CATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGG 57676 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || || || ||||| | ||||||||| || || || || || || || || Sbjct 57675 CCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAAT 57616 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCG---CTGTCATGT 50136 || ||||| || ||||| ||||| || || | || || | | | | |||| Sbjct 57615 ATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCAAACGTCGAGTGTTGGTCAGAA 57556 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| | ||||||| || |||||||| || | ||||| || ||||| ||||| | | Sbjct 57555 ATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTCA 57496 Query 50197 AAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATT 50256 || ||||| | || | ||| || | || || ||||| | ||| |||| | Sbjct 57495 AACAGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGTC 57436 Query 50257 TCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATC 50316 || || ||||||||||| || ||||| || ||||| ||||| | |||||||| | | Sbjct 57435 TCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCGACC 57376 Query 50317 TGCACTTCTGTACAAAATCGTTC-AGCTAAATTTTCATTCACTATTCCGTCACTGGCTGC 50375 || ||||| | |||| || || ||| || || || || |||||||| || || || Sbjct 57375 TGGACTTCATTGGAAAAACGCTCGAGC-AAGTTCTCGTTGACTATTCCATCCGAAGCGGC 57317 Query 50376 AAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA---GTTTATTCCA 50432 ||| || || | ||||| || || || |||||| | | | || ||||| Sbjct 57316 AAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGTTGTCATTAAGGCGATTGTTCCA 57257 Query 50433 ATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 50492 || | | |||||| || | || | ||| || ||||||| ||||| || || ||||| Sbjct 57256 GTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGAATGAAGCTTCGGCCTT 57197 Query 50493 TTTATACATATTCCAGAT 50510 |||||||| | ||| || Sbjct 57196 CTTATACATCTGCCAAAT 57179 Score = 174 bits (192), Expect = 2e-38 Identities = 374/556 (67%), Gaps = 6/556 (1%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || ||||| || || ||||| || || | ||||| ||||| || ||| Sbjct 55499 AACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGTTCATTTGAA 55558 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || ||||| || ||||| | |||||||| || | ||||||||| || || || || || Sbjct 55559 AATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCGAACGATCCC 55618 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC--GC 50128 ||||| || || |||||||| ||||| ||||| || |||| || || | | | || Sbjct 55619 GAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCAAACGTTGATTGC 55678 Query 50129 T-GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 | ||| ||||||| | ||||||| ||||| || || | | || || || || Sbjct 55679 TTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGAATTGTCTCA 55738 Query 50188 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGA 50247 || || | ||| | | | |||| ||| | | || ||||| || | || Sbjct 55739 ATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCAATGAGCAGG 55798 Query 50248 CTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCC 50307 || | || || || | |||||| || |||||||| || |||||||| | ||| Sbjct 55799 GAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAACAACGCGCC 55858 Query 50308 TCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCA 50367 || | | ||| || || | ||||||||||| | | ||||| || || || || || Sbjct 55859 TCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACGATACCATCG 55918 Query 50368 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGT--- 50424 ||| || |||||||||| ||||| || |||| | |||||| | | ||| Sbjct 55919 GAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTTCGAGTTGAGTTTG 55978 Query 50425 TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484 |||||||| || ||| || | || | |||| ||| ||| | |||||||| |||||| Sbjct 55979 TTATTCCAGTCTATGAGGTCATGCGACAGGTCTATTTCCTCCGCAGTCCAAAAGGATGCC 56038 Query 50485 TCTGCCTTTTTATACA 50500 | ||| | ||| |||| Sbjct 56039 TGTGCTTGTTTGTACA 56054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264391625240