Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq53 167 2e-36 >seq53 Length=257799 Score = 167 bits (184), Expect = 2e-36 Identities = 371/552 (67%), Gaps = 11/552 (2%) Strand=Plus/Minus Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931 || || ||||| ||| | ||||||||| | ||||||||||| ||||||||||| | Sbjct 57735 CATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGG 57676 Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991 || ||||| | || |||||||| | ||||||||| | || || || || || || ||| Sbjct 57675 CCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAAT 57616 Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14051 || || || || || || || || | | ||||| |||||| | | || || || Sbjct 57615 ATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCAAACGTCGAGTGTTGGTCAGAA 57556 Query 14052 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14111 ||||| | ||||||||| | || || || || || || |||||||| || | | Sbjct 57555 ATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTCA 57496 Query 14112 AATAAATATTCCTTCTCTTTA--GTACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169 || | ||||||| ||| | | |||| |||||||| || || || | |||| Sbjct 57495 AACAGATATTCCCGCTCGGCAACATCCTTG--ATGTATGTGTCGATGAGGAGAGAATACG 57438 Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTC--CGA 14227 | || ||||| ||||||||||| ||||| || || ||||| || | ||| || ||| Sbjct 57437 TCTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCGA 57378 Query 14228 CCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGC 14287 || || ||||| | |||| | ||| ||| || || || ||||| ||||| ||| Sbjct 57377 CC--TGGACTTCATTGGAAAAACGCTCGAGCAAGTTCTCGTTGACTATTCCATCCGAAGC 57320 Query 14288 TGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTC---TTCATTGTTGAGTTTTTT 14344 ||||| || || | | | || |||| |||| ||||| | | || || Sbjct 57319 GGCAAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGTTGTCATTAAGGCGATTGTT 57260 Query 14345 CCAATCGGATAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGC 14404 ||| ||| | ||| || || || || | ||| || ||||||| || ||| | || Sbjct 57259 CCAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGAATGAAGCTTCGGC 57200 Query 14405 TTTTTTATACAT 14416 || |||||||| Sbjct 57199 CTTCTTATACAT 57188 Score = 156 bits (172), Expect = 4e-33 Identities = 309/454 (68%), Gaps = 4/454 (1%) Strand=Plus/Plus Query 13850 TTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAAT 13909 ||| ||||| | || | || || || || || |||||| || ||||| | ||||| Sbjct 55486 TTTGAGATGCGTGAACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAAT 55545 Query 13910 AAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGC 13969 |||||| ||||||||||| | || ||||| || || || || || | ||||||||| | Sbjct 55546 AAGTTCATTTGAAAATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGA 55605 Query 13970 AGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCC 14029 || || || || ||||| ||||| || || || || || || || | | |||||| | Sbjct 55606 GGCGAACGATCCCGAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGC 55665 Query 14030 AAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAA 14089 ||||| || || |||| || |||||| | |||||| || | ||| || || | Sbjct 55666 AAACGTTGATTGCTTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGA 55725 Query 14090 ATCCATTGTTTCAATAGCATTAAA-TAAATATTCCTTCTCTTTAGTACT-TGAAATGTAT 14147 ||||| |||||||| | ||| ||| | ||| | || || || ||||| Sbjct 55726 TGGAATTGTCTCAATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTG--ATGTAG 55783 Query 14148 GTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCA 14207 |||||||| || | | || | || ||||||| |||||| || |||||||||||| Sbjct 55784 GTATCAATGAGCAGGGAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCA 55843 Query 14208 TAAAAGCATCTAGCTTCCGACCATTGTACTTCCGAGTAAAATCTTTCGGCCAAATTTTCA 14267 || || || | || || | | || || || | |||||| ||| | | ||||| Sbjct 55844 TAGAAACAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCG 55903 Query 14268 TTAACTATACCATCACTAGCTGCAAAAAATGCCA 14301 ||||| |||||||| || || ||||| |||| Sbjct 55904 TTAACGATACCATCGGAGGCAGCGAAAAACGCCA 55937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479725055669400