Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq53 210 3e-49 >seq53 Length=257799 Score = 210 bits (232), Expect = 3e-49 Identities = 386/560 (69%), Gaps = 12/560 (2%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 |||||||||||| |||| |||||||| | ||||| | ||| || ||||| ||||| Sbjct 57735 CATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGG 57676 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || || || ||||| | ||||||||| || || || ||||| || || || Sbjct 57675 CCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAAT 57616 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGT----CATG 42240 || ||||| || || || ||||| | || | || || ||| | ||| || Sbjct 57615 ATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCA-AACGTCGAGTGTTGGTCAGA 57557 Query 42241 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 42300 |||||| | ||||||| || |||||||| || | ||||| || ||||| ||||| | Sbjct 57556 AATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTC 57497 Query 42301 AAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACAT 42360 ||| ||||| | || | ||| || | ||||| ||||| | ||| |||| | Sbjct 57496 AAACAGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGT 57437 Query 42361 TTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAAC 42420 || || ||||||||||| || ||||| || ||||| ||||| | ||||||| || Sbjct 57436 CTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCGAC 57377 Query 42421 CTGTACTTCTGTACAAAATCGTTC-AGCTAAATTTTCGTTCACTATTCCGTCACTGGCTG 42479 ||| ||||| | |||| || || ||| || || ||||| |||||||| || || | Sbjct 57376 CTGGACTTCATTGGAAAAACGCTCGAGC-AAGTTCTCGTTGACTATTCCATCCGAAGCGG 57318 Query 42480 CAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTC 42535 |||| || || | ||||| || || | |||| | |||| || ||| Sbjct 57317 CAAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGT-TGTCATTAAGGCGATTGTTC 57259 Query 42536 CAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCC 42595 || || | | |||||| || | || | ||| ||| | ||||| ||||| ||||| ||| Sbjct 57258 CAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGAATGAAGCTTCGGCC 57199 Query 42596 TTTTTATACATATTCCAGAT 42615 || |||||||| | ||| || Sbjct 57198 TTCTTATACATCTGCCAAAT 57179 Score = 168 bits (186), Expect = 9e-37 Identities = 373/557 (67%), Gaps = 8/557 (1%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || ||||| || || ||||| ||||| | ||||| | ||| || ||| Sbjct 55499 AACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGTTCATTTGAA 55558 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || ||||| || ||||| | |||||||| || | ||||||||| || || || ||||| Sbjct 55559 AATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCGAACGATCCC 55618 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 ||||| || || |||||||| || || ||||| | |||| || || ||| | || Sbjct 55619 GAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCA-AACGTTGATTG 55677 Query 42236 ----TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 || ||||||| | ||||||| ||||| || || | | || || || || Sbjct 55678 CTTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGAATTGTCTC 55737 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 || || | ||| | | | |||| ||| | | || ||||| || | || Sbjct 55738 AATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCAATGAGCAG 55797 Query 42352 ACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 || | ||||| || | |||||| || |||||||| || |||||||| | || Sbjct 55798 GGAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAACAACGCGC 55857 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 ||| | ||||| || || | ||||||||||| | | |||||||| || || || || Sbjct 55858 CTCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACGATACCATC 55917 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT-- 42529 ||| || |||||||||| ||||| || |||||| ||||| || | | | Sbjct 55918 GGAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTTCGAGTTGAGTTT 55977 Query 42530 -TTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGC 42588 |||||||| || ||| || | || | |||| ||| || | |||||||| ||||| Sbjct 55978 GTTATTCCAGTCTATGAGGTCATGCGACAGGTCTATTTCCTCCGCAGTCCAAAAGGATGC 56037 Query 42589 TTCTGCCTTTTTATACA 42605 | ||| | ||| |||| Sbjct 56038 CTGTGCTTGTTTGTACA 56054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671135080883160