Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq53 138 1e-27 >seq53 Length=257799 Score = 138 bits (152), Expect = 1e-27 Identities = 316/476 (66%), Gaps = 0/476 (0%) Strand=Plus/Plus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||||| | |||| || || || || || || | |||||||| | || || || Sbjct 55490 AGATGCGTGAACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGT 55549 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || ||||||||||| || || ||||| | || || || || ||||||||||| | || Sbjct 55550 TCATTTGAAAATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCG 55609 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 ||||| |||||||||||||| ||||| || || || || || | || | ||| || || Sbjct 55610 AACGATCCCGAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCAAAC 55669 Query 13313 GTACTATTTTTACTCTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTC 13372 || | || | |||||||| | ||||| | ||||| | || | | | Sbjct 55670 GTTGATTGCTTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGA 55729 Query 13373 ATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCT 13432 || | || || |||| ||| ||| | | || | |||| || || ||||| Sbjct 55730 ATTGTCTCAATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCA 55789 Query 13433 ATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAA 13492 || | | | || | ||||| || | ||||| ||| || || |||||||| ||| Sbjct 55790 ATGAGCAGGGAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAA 55849 Query 13493 CATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACT 13552 || | ||||| | |||||||| ||| | |||||| ||| | | |||||||||||| Sbjct 55850 CAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACG 55909 Query 13553 ATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTT 13608 || || || ||||| ||||| || || | ||| ||| || | | |||||| Sbjct 55910 ATACCATCGGAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTT 55965 Score = 138 bits (152), Expect = 1e-27 Identities = 379/576 (66%), Gaps = 5/576 (1%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 ||||| | |||| | ||||| ||||| |||| || ||||| | || || || Sbjct 57753 AGATGGCTGAACAAGAGGCATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGT 57694 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 || ||||||||||| || || |||||||| || |||||||| ||||||||||| | || Sbjct 57693 TCATTTGAAAATGTGAGGCCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCG 57634 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATAC 13312 ||||| ||||| |||||||| ||||| || || || || || | | | ||| || || Sbjct 57633 AACGATCCCGAGAAAAATATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCAAAC 57574 Query 13313 GTACTATTTTTACTC-TCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTT 13371 || | | | || || |||||| | ||||| | || || | || | ||| Sbjct 57573 GT-CGAGTGTTGGTCAGAAATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGG 57515 Query 13372 CATATTTTCTATTGCGTTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATC 13431 || |||| || |||| ||| | ||| | || | || || || || || Sbjct 57514 GATGGTTTCAATGGCGTCAAACAGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTC 57455 Query 13432 TATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAA 13491 || | | |||| | || || ||||| ||||||||| || ||||| || ||||| Sbjct 57454 GATGAGGAGAGAATACGTCTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAA 57395 Query 13492 ACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAAC 13551 ||| | |||||| | ||||| ||||| | |||| | || ||||| ||||| || Sbjct 57394 ACACCGAGCCTCGGCGACCTGGACTTCATTGGAAAAACGCTCGAGCAAGTTCTCGTTGAC 57335 Query 13552 TATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTC 13611 ||| || || ||| ||||| || || || | || || || | ||||| || Sbjct 57334 TATTCCATCCGAAGCGGCAAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGTTGTC 57275 Query 13612 -TGACAAC--TTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCA 13668 | | | || ||| || ||| |||||| || | || | ||||| | ||||| Sbjct 57274 ATTAAGGCGATTGTTCCAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCA 57215 Query 13669 AAAAGAAGCAACAGCCTTCTTATACATCATCCATAT 13704 || ||||| | ||||||||||||||| ||| || Sbjct 57214 GAATGAAGCTTCGGCCTTCTTATACATCTGCCAAAT 57179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430979820974382