Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq53 143 6e-29 seq151 140 7e-28 seq86 123 6e-23 >seq53 Length=257799 Score = 143 bits (158), Expect = 6e-29 Identities = 379/568 (67%), Gaps = 22/568 (4%) Strand=Plus/Minus Query 268733 ATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTG 268792 |||||| || |||||||||| || || || |||||||||| || ||| |||| ||| Sbjct 56064 ATATGGCGGCTGTACAAACAAGCACAGGCATCCTTTTGGACTGCGGAGGAAATAGACCTG 56005 Query 268793 TCTTATGACTTAATAGATTGGAAAAATTTAA--AACCAGAAGAAAGAAGATTT-ATATCT 268849 || ||||| | ||||| ||||| || | ||| ||| || | |||| || || Sbjct 56004 TCGCATGACCTCATAGACTGGAATAACAAACTCAACTCGAACGAACGATATTTCATTTCG 55945 Query 268850 TATATTCTTGCGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAG 268909 || |||| |||||||| || | |||||||||||||||||||| || || || | | Sbjct 55944 CATGTTCTGGCGTTTTTCGCTGCCTCCGATGGTATCGTTAACGAAAACCTCGTTGA-ACG 55886 Query 268910 TTCTGTCAA-GAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTAT 268968 | | ||| ||||| ||| | |||| || | ||||| || || || ||||| || Sbjct 55885 ATTTTCCAACGAGGTTCAGGTGGCTGAGGCGCGTTGTTTCTATGGTTTTCAGATCATGAT 55826 Query 268969 AGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATAT-AGATGATAACA 269027 |||||| | || ||||||| ||| || | || ||||| || || || | | Sbjct 55825 AGAAAACGTACACTCAGAGACCTACTCCCTGCTCATTGATACCTACATCAG------AGA 55772 Query 269028 ACGAAAAGAAAAGACTATTTTCTT-----CTA-TGAGAACTATGGACTGTGTGAGaaaaa 269081 | | || |||| |||| || ||| |||| || || | | | | Sbjct 55771 CCTGGATGACCGGACTCTTTTGTTTGACGCTATTGAG-ACAATTCCATCCATCAAGCGCA 55713 Query 269082 aaTCTGAATGGGCTCTGAAATGGATAAACGA-TAGC--GCGCCTTACGGAGAAAGGTTAG 269138 || | || |||||||| | |||||| || ||| | | | | ||| | | | Sbjct 55712 AAGCCGAGTGGGCTCTCAGGTGGATAGCGGACAAGCAATCAACGTTTGCGGAACGACTGG 55653 Query 269139 TTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGT 269198 | || || |||||||||||||| ||||| |||||||| || || ||| | || |||||| Sbjct 55652 TCGCCTTCGCCGCTGTAGAAGGCATATTTTTTTCGGGATCGTTCGCCTCGATATTTTGGA 55593 Query 269199 TGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACG 269258 ||||||| | || | ||||| || | || || || || ||| | || ||| |||| | Sbjct 55592 TGAAGAAGCGTGGTTTCATGCCTGGCCTCACATTTTCAAATGAACTTATTAGCCGGGATG 55533 Query 269259 AAGGTTTACACTGCGACTTCGCTTGTTT 269286 ||||| | || ||||||||||| || Sbjct 55532 AAGGTCTTCATACGGACTTCGCTTGCTT 55505 >seq151 Length=73757 Score = 140 bits (154), Expect = 7e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389 ||||| || | || | ||| |||||||| | ||| || || ||||||||||| ||||| Sbjct 41345 ATTCCTCCACGGAGACGAAGGACTAGATGAAGTGTCGACTCCTTCTGAATATTGTAGTCG 41404 Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449 || ||||| | ||| ||||| || || || ||||| || || || | || || || ||| Sbjct 41405 GAAAGAGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGA 41464 Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509 || || ||||| || ||||||||||| | || ||||| || | || ||| | || Sbjct 41465 GGGATGCCTTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGACGACTCG 41524 Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 ||||| || || || ||||| || || || ||||| || || |||||||| Sbjct 41525 ACCTCGAGAGTGATCGTCTTCCCTGTCAGGGTTTTGACGAAGATCTGCAT 41574 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 ||||||||||||||||| || || ||||| | ||||| || || ||||| || || ||| Sbjct 41156 TCTTTCTGAATATTATAATCCGAGAGAGTACGGCCGTCCTCGAGCTGTTTGCCGGCGAAA 41215 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | || || |||||||| || ||||| || ||||| ||||| || || ||||| Sbjct 41216 ATGAGACGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTCGCCTTCACATTG 41275 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| ||| || || ||||| | || || ||||| || || | || || || Sbjct 41276 TCGATGGTGTCGGAAGACTCCACCTCCAAAGTGATGGTCTTGCCCGTCAACGTCTTCACG 41335 Query 104549 AATATCTGCATT 104560 || ||||||||| Sbjct 41336 AAGATCTGCATT 41347 >seq86 Length=184889 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 104354 AGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGT 104413 ||||| | || || || |||||||| ||||||||||| || || | |||||||| || Sbjct 22570 AGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGTCCGTCTTCAAGC 22629 Query 104414 TGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC 104473 || || ||||||||||| || | || || || || || || || ||||||||||| ||| Sbjct 22630 TGCTTGCCAGCAAAAATCAGACGTTGCTGGTCCGGCGGAATGCCCTCTTTATCCTGGATC 22689 Query 104474 TTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCA 104533 || || || || || || | ||||| | || || || || || |||||||| || Sbjct 22690 TTGGCCTTGACGTTGTCGATAGTATCCGATGACTCGACTTCGAGGGTGATAGTCTTTCCT 22749 Query 104534 GTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || |||||||| Sbjct 22750 GTGAGCGTCTTGACGAAGATCTGCAT 22775 Score = 120 bits (132), Expect = 7e-22 Identities = 141/191 (74%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || ||||| ||||| ||||| || || || | || || || || || || |||||||| Sbjct 22308 TCCTTCTGGATATTGTAGTCGGAGAGTGTCCGCCCATCCTCAAGCTGCTTGCCAGCAAAG 22367 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | || ||| || ||||| || || ||||| || ||||||||||| || || || || Sbjct 22368 ATCAACCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTTGACGTTG 22427 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||| | || ||||| || ||||| ||||| || || || || || ||| Sbjct 22428 TCAATCGTATCGGACGACTCAACCTCGAGGGTAATCGTCTTCCCCGTGAGCGTCTTGACA 22487 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 22488 AAGATCTGCAT 22498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151391156624628