Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq2 118 2e-22 seq89 105 1e-18 seq14 95.1 2e-15 >seq2 Length=913729 Score = 118 bits (130), Expect = 2e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | | |||||| || || || || || || || ||||| ||||| Sbjct 253130 GCCAAGCGTCACCGTAAAATTCTTCGTGACAATATTCAGGGTATTACAAAGCCGGCTATT 253189 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||||||||| || || |||||| | || || || ||||||| |||| Sbjct 253190 CGTCGTCTGGCTCGTCGTGGAGGTGTGAAGCGTATATCCGGGCTGATCTATGAGGAGACC 253249 Query 16553 CGTGATGTTTTGAAGATCTTCCT 16575 || | ||| |||||||||||||| Sbjct 253250 CGAGGTGTCTTGAAGATCTTCCT 253272 Score = 118 bits (130), Expect = 2e-22 Identities = 112/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || |||||||| || | | ||||| || || ||||| || || || ||||| ||||| Sbjct 277745 GCCAAGCGTCACCGTAAAATCCTTCGTGACAATATCCAGGGTATTACAAAGCCGGCTATT 277686 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||||||||||||||| || || |||||| | || || || ||||||| |||| Sbjct 277685 CGTCGTCTGGCTCGTCGTGGAGGTGTGAAGCGTATATCCGGGCTGATCTATGAGGAGACC 277626 Query 16553 CGTGATGTTTTGAAGATCTTCCT 16575 || | ||| |||||||||||||| Sbjct 277625 CGAGGTGTCTTGAAGATCTTCCT 277603 >seq89 Length=163956 Score = 105 bits (116), Expect = 1e-18 Identities = 115/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| || ||||| || || || ||||||||||| ||||||||| |||| Sbjct 116025 AGGTATCACCAAGCCCGCCATCCGCCGCCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTC 115966 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 || | ||||||| |||| || | ||| | |||||||||||| ||| ||| |||| Sbjct 115965 CGGTCTCATCTATGAGGAGACCCGCGGTGTCCTCAAGATCTTCCTCGAGAACGTCATCCG 115906 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 || | || || || |||||||| || || Sbjct 115905 CGACTCCGTCACTTACACTGAGCACGCCAAGCG 115873 >seq14 Length=528474 Score = 95.1 bits (104), Expect = 2e-15 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 16487 GCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAA 16546 ||||| || ||||| ||||||||||| || ||||||||| | || || | | || || Sbjct 515525 GCTATTCGCCGTCTTGCTCGTCGTGGAGGTGTCAAGCGTATTTCCGGCCTCATTTACGAG 515584 Query 16547 GAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTAT 16606 |||| |||| ||| | ||||||||||| ||| || |||| ||| | || |||| Sbjct 515585 GAGACACGTGGTGTACTCAAGATCTTCCTGGAGAATGTCATCCGTGACTCCGTCACCTAT 515644 Query 16607 ACCGAGCACGCTAAACG 16623 |||||||| |||||||| Sbjct 515645 ACCGAGCATGCTAAACG 515661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074751075263