Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq53 123 3e-23 >seq53 Length=257799 Score = 123 bits (136), Expect = 3e-23 Identities = 346/535 (65%), Gaps = 5/535 (1%) Strand=Plus/Plus Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| ||| || || || || ||| | ||||||||||| || || | |||||| ||| Sbjct 55499 AACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGTTCATTTGAA 55558 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCT 21586 ||||| | || ||||| || || | ||| || | ||||||||| || || || | ||| Sbjct 55559 AATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCGAACGATCCC 55618 Query 21587 GAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCT 21646 ||||| || ||||| || || || || || || || | |||||| | | || |||| Sbjct 55619 GAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCAAACGTTGATTGC 55678 Query 21647 TTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCA 21706 || ||| |||||| | ||||| | || || || || | |||||| ||| Sbjct 55679 TTGTCCGCTATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGAATTGTCTCA 55738 Query 21707 ATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNA 21766 ||||| | || | | || | ||||| | || | ||| Sbjct 55739 ATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCAATGAGCAGG 55798 Query 21767 CTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCC 21826 || | || || |||| ||||||||| |||||||| || || ||||| | ||| Sbjct 55799 GAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAACAACGCGCC 55858 Query 21827 TCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCA 21886 || | ||||||||| ||||||||| | | | |||||| || || || ||||| Sbjct 55859 TCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACGATACCATCG 55918 Query 21887 CTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTT 21946 ||| || ||||| |||| | || || |||||||||||||| ||| | ||| Sbjct 55919 GAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTT-CGAGTTGAGTTT 55977 Query 21947 ----TTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAG 21997 ||||| |||| | || | || | |||| ||| || | ||||||||| Sbjct 55978 GTTATTCCAGTCTATGAGGTCATGCGACAGGTCTATTTCCTCCGCAGTCCAAAAG 56032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531897535458840