Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq53 210 3e-49 >seq53 Length=257799 Score = 210 bits (232), Expect = 3e-49 Identities = 386/559 (69%), Gaps = 10/559 (2%) Strand=Plus/Minus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 |||||||||||| |||| ||||| || | ||||| ||||| || ||||| ||||| Sbjct 57735 CATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGG 57676 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || || || ||||| | ||||||||| || ||||| ||||| || || || Sbjct 57675 CCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAAT 57616 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAAC--CG-GCGCT-GTCATG 33479 || ||||| || || || ||||| | || | || || ||| || | | | |||| Sbjct 57615 ATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCA-AACGTCGAGTGTTGGTCAGA 57557 Query 33480 TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33539 |||||| | ||||||| || |||||||| || | ||||| || ||||| ||||| | Sbjct 57556 AATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTC 57497 Query 33540 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33599 ||| ||||| | || | ||| || | || || ||||| | ||| |||| | Sbjct 57496 AAACAGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGT 57437 Query 33600 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33659 || || ||||||||||| || ||||| || ||||| ||||| | |||||||| | Sbjct 57436 CTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCGAC 57377 Query 33660 CTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGC 33719 ||| ||||| | |||| || || ||| || || || |||||||| || || || Sbjct 57376 CTGGACTTCATTGGAAAAACGCTCGAGCAAGTTCTCGTTGACTATTCCATCCGAAGCGGC 57317 Query 33720 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTA----GTTTATTCC 33775 ||| || || | ||||| || || | |||| || ||| | || |||| Sbjct 57316 AAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGT-TGTCATTAAGGCGATTGTTCC 57258 Query 33776 AATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCT 33835 | || | | |||||| || | || | ||| || ||||||| ||||| || || |||| Sbjct 57257 AGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGAATGAAGCTTCGGCCT 57198 Query 33836 TTTTATACATGTTCCAGAT 33854 | |||||||| | ||| || Sbjct 57197 TCTTATACATCTGCCAAAT 57179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622943376661560