Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq53 102 2e-16 seq76 89.7 1e-12 >seq53 Length=257799 Score = 102 bits (112), Expect = 2e-16 Identities = 153/216 (71%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT----GAACAATGAACGTTCATTCGC 22487 || ||||| ||||| || ||||| || | ||||| || ||| || | || || Sbjct 57521 ATCAAGAAGAAGGCGGAATGGGCTCTCAGGTGGATTTCTGACCAACACTCGA-CGTTTGC 57579 Query 22488 GGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547 |||||||| | || || || | || |||||||| || || || ||| | || | Sbjct 57580 CGAACGTCTCGTCGCCTTCGCCGCTGTGGAAGGCATATTTTTCTCGGGATCGTTCGCCTC 57639 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 || |||||| | |||||||| | ||||||| || || || ||||||||||| | || Sbjct 57640 GATATTTTGGATGAAAAAACGCGGTCTTATGCCTGGCCTCACATTTTCAAATGAACTTAT 57699 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 |||||| |||||||| | ||||||||||| || || Sbjct 57700 TAGCCGTGATGAGGGCATGCATACCGATTTCGCATG 57735 Score = 100 bits (110), Expect = 7e-16 Identities = 306/469 (65%), Gaps = 13/469 (3%) Strand=Plus/Minus Query 22189 AACGAACAACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTT 22248 ||||||| | |||| || || |||| || || || ||| || | || ||||| ||| Sbjct 55965 AACGAACGATATTTCATTTCGCATGTTCTGGCGTTTTTCGCTGCCTCCGATGGTATCGTT 55906 Query 22249 TTTGAGAATCTAGT-GACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTT 22307 || || || || || ||||| || | || |||| | ||||| | ||||| Sbjct 55905 AACGAAAACCTCGTTGAACGATTTTCCAAC-GAGGTTCAGGTGGCTGAGGCGCGTTGTTT 55847 Query 22308 CTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACA 22367 ||||||| | || || ||||| ||||| || ||| | || || || || || | || Sbjct 55846 CTATGGTTTTCAGATCATGATAGAAAACGTACACTCAGAGACCTACTCCCTGCT----CA 55791 Query 22368 GTCACTCGTAGAAGATAAAGACGAACAACGAAACT----TATTCCGCGCGATTCGCACCA 22423 | | | || | | | | | | || ||| | || ||| ||| || | Sbjct 55790 TTGATACCTACATCAGAGACCTGGATGACCGGACTCTTTTGTTTGACGCTATTGAGACAA 55731 Query 22424 TTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTT 22480 ||| ||| || ||| || || || ||||| || | ||||| | |||| || Sbjct 55730 TTCCATCCATCAAGCGCAAAGCCGAGTGGGCTCTCAGGTGGATAGCGGACAAGCAATCAA 55671 Query 22481 CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCAT 22540 | || |||||||| || | || || || | || |||||||| || ||||| ||| | | Sbjct 55670 CGTTTGCGGAACGACTGGTCGCCTTCGCCGCTGTAGAAGGCATATTTTTTTCGGGATCGT 55611 Query 22541 TTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATG 22600 | | || |||||| | || || |||| | ||||| || || || |||||||||| Sbjct 55610 TCGCCTCGATATTTTGGATGAAGAAGCGTGGTTTCATGCCTGGCCTCACATTTTCAAATG 55551 Query 22601 AGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCT 22649 | | |||||||| ||||| ||||||||||| || || || || |||| Sbjct 55550 AACTTATTAGCCGGGATGAAGGTCTTCATACGGACTTCGCTTGCTTGCT 55502 >seq76 Length=175981 Score = 89.7 bits (98), Expect = 1e-12 Identities = 179/261 (69%), Gaps = 6/261 (2%) Strand=Plus/Minus Query 363415 TCCTACCTATCTC-GTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 |||||||| |||| |||||||||| | | | || || || || |||||| | ||||| Sbjct 106932 TCCTACCT-TCTCCGTATCAATGGGCGTGTCGCAGAGCGTCCCCAACATATGATCATGCG 106874 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCG--ATTGAAACATATAAGCTT 363531 ||| || | || || ||| | | || | || ||| | |||||||| ||||| || Sbjct 106873 TGTCGCCGTCGGCATTCATGGTTCAGACATCGA--CCGTGTCATTGAAACTTATAACCTC 106816 Query 363532 CTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | | || ||||||||||| |||| || | | ||||||||| || | || Sbjct 106815 ATGTCCGAACGCTATTTCACGCACGCATCGCCTACCCTCTTCAATGCTGGTACACCACAT 106756 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 ||||| | ||| ||||| | | ||||||||||| || || ||||| |||| | Sbjct 106755 CCACAACTTAGTTCATGCTTCTTGGTCTGCATGAAGGACGACTCTATTGAGGGCATCTAT 106696 Query 363652 GACACACTTAAGAATTGTGCT 363672 |||||||| || | |||||| Sbjct 106695 GACACACTAAAAAGCTGTGCT 106675 Score = 87.8 bits (96), Expect = 5e-12 Identities = 212/321 (66%), Gaps = 0/321 (0%) Strand=Plus/Minus Query 364194 CAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTAT 364253 |||||||||||| || | | ||||| || || | ||||| || || || || || Sbjct 105997 CAAGTCCAACCAAAAGAATTTGGGTACCATCAAGTCGTCGAACCTTTGCACAGAAATCAT 105938 Query 364254 TGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGC 364313 ||||||| | | ||||| || || || || || || || || ||| | || || || | Sbjct 105937 TGAATACTCTTCACCCGAAGAAACCGCTGTTTGCAATCTCGCCTCGTTGGCTCTCCCTAC 105878 Query 364314 GTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTAC 364373 || | ||||| || | || |||| | || | || || ||| | | | | Sbjct 105877 CTTCATCAAAGACGGCGTCTACGATTTCCAGAAACTCCACGATGTCACCAAGGTCGTTGC 105818 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 | |||||| || ||||||||| || || ||||| ||||||||||| || || Sbjct 105817 GTTCAATCTGAACCGCATTATCGACATCAACTACTATCCCATTCCTGAAGCTCGTCGCTC 105758 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || | ||||| || || ||||| | ||||| ||||| ||||| || ||||||| Sbjct 105757 GAACTTCCGTCACCGTCCCATTGGCATCGGTGTGCAGGGTCTCGCCGATACTTTTATGGC 105698 Query 364494 GCTCAAGATGGCATTTGATTC 364514 || | ||| |||| || || Sbjct 105697 TCTTCATATGCCATTCGACTC 105677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303345400683962