Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq246 93.3 3e-14 seq219 93.3 3e-14 seq151 93.3 3e-14 seq86 86.0 4e-12 >seq246 Length=14168 Score = 93.3 bits (102), Expect = 3e-14 Identities = 62/69 (90%), Gaps = 5/69 (7%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 14026 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 13967 Query 25957 TAATCCTTT 25965 |||||| || Sbjct 13966 TAATCCATT 13958 >seq219 Length=22619 Score = 93.3 bits (102), Expect = 3e-14 Identities = 62/69 (90%), Gaps = 5/69 (7%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 118 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 177 Query 25957 TAATCCTTT 25965 |||||| || Sbjct 178 TAATCCATT 186 >seq151 Length=73757 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/207 (71%), Gaps = 4/207 (2%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| || |||||| ||||||||||| || || | | ||| | || || | || Sbjct 41371 ATGAAGTGTCGACTCCTTCTGAATATTGTAGTCGGAAAGAGTACGACCATCTTCCAGCTG 41430 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || || || || || ||||| || |||| |||| |||||| |||||| ||| || Sbjct 41431 CTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGAATCTT 41490 Query 38234 TTGCTTCACATTCTGGACAGTATC--TCCACTTTCAACTTCTAATGTAATAGTTTTACCC 38291 ||| ||||| | || ||| || | || || || || | || || || || || Sbjct 41491 GGTCTTGACATTGTCGATAGTGTCGGACGAC--TCGACCTCGAGAGTGATCGTCTTCCCT 41548 Query 38292 GTCAAGGTTTTCACGAATATCTGCATG 38318 |||| |||||| ||||| ||||||||| Sbjct 41549 GTCAGGGTTTTGACGAAGATCTGCATG 41575 >seq86 Length=184889 Score = 86.0 bits (94), Expect = 4e-12 Identities = 144/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 38114 ATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTG 38173 |||||| ||| |||||| || |||||||| || || | | ||| | || || | ||| Sbjct 22849 ATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTACGACCATCTTCCAGTTG 22908 Query 38174 TTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTT 38233 || || ||||| || ||||||||||| || | |||| ||| || |||||| || || Sbjct 22909 CTTACCTGCAAAAATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGGATCTT 22968 Query 38234 TTGCTTCACATTCTGGACAGTATCTCCAC-TTTCAACTTCTAATGTAATAGTTTTACCCG 38292 ||| ||||| | || || || | || |||||||| | || || || || || | Sbjct 22969 GGCCTTGACATTGTCGATGGTGTC-CGACGACTCAACTTCGAGGGTGATGGTCTTCCCTG 23027 Query 38293 TCAAGGTTTTCACGAATATCTGCATG 38318 ||| || || || || || |||||| Sbjct 23028 TCAGAGTCTTAACAAAGATTTGCATG 23053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945195655021