Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq53 192 7e-44 >seq53 Length=257799 Score = 192 bits (212), Expect = 7e-44 Identities = 381/560 (68%), Gaps = 7/560 (1%) Strand=Plus/Minus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| || || |||||||| | || || || || || | ||||| ||||| | Sbjct 57736 GCATGCGAAATCGGTATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAG 57677 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || || ||||| || | ||||||||| || || || || || ||||| Sbjct 57676 GCCAGGCATAAGACCGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAA 57617 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 ||| |||||||| || || || || || | |||||||||||| | | | || | | Sbjct 57616 TATGCCTTCCACAGCGGCGAAGGCGACGAGACGTTCGGCAAACGTCG-AGTGTTGGT-CA 57559 Query 93271 G--ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCG 93328 | ||||| | | |||||| || || || ||||| || ||||| | ||||| || ||| Sbjct 57558 GAAATCCACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCG 57499 Query 93329 TTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATAC 93388 | ||| || || || |||||| | ||| |||||||| ||||| | ||||||||| Sbjct 57498 TCAAACAGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATAC 57439 Query 93389 ATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTG 93448 | || || || | || ||||| ||| ||||| ||||| ||||| | ||| || | | Sbjct 57438 GTCTCGGAGTGAATGTTTTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCG 57379 Query 93449 ATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCT 93508 | ||| ||||| | ||||| | ||| | | || || |||||||| ||||| || || Sbjct 57378 ACCTGGACTTCATTGGAAAAACGCTCGAGCAAGTTCTCGTTGACTATTCCATCCGAAGCG 57319 Query 93509 GCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTATCC 93565 ||||| || || | | ||| || || || ||| | || |||| | || | | Sbjct 57318 GCAAAGAAGGCGAGAACATGAGAGATGAAGTGACGCTCGTTGTCATTAAGGCGATTGTTC 57259 Query 93566 CAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCT 93625 || ||| |||||||| || || || | ||| || | ||||| || || ||||| || Sbjct 57258 CAGTCGTGAAGATCTTTCGAGAGGTCCATTTCCTCTGCTGTCCAGAATGAAGCTTCGGCC 57199 Query 93626 TTTTTGTACATATCCCATAT 93645 || || ||||| | ||| || Sbjct 57198 TTCTTATACATCTGCCAAAT 57179 Score = 161 bits (178), Expect = 1e-34 Identities = 375/563 (67%), Gaps = 13/563 (2%) Strand=Plus/Plus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 || ||| ||||| || ||||| ||||| | |||||| || || || | ||||| Sbjct 55497 TGAACAGCAAGCAAGCGAAGTCCGTATGAAGACCTTCATCCCGGCTAATAAGTTCATTTG 55556 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 ||||| | || || | | || || ||||| | ||||||||| || || || | Sbjct 55557 AAAATGTGAGGCCAGGCATGAAACCACGCTTCTTCATCCAAAATATCGAGGCGAACGATC 55616 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 | ||||||||||| ||||| || || || || || || | ||||| ||||| ||| Sbjct 55617 CCGAAAAAAATATGCCTTCTACAGCGGCGAAGGCGACCAGTCGTTCCGCAAACGTTG--- 55673 Query 93261 AATTACT-----GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAG 93315 ||| || ||| ||||| | | |||||| |||||||| ||| || | || | Sbjct 55674 -ATTGCTTGTCCGCT-ATCCACCTGAGAGCCCACTCGGCTTTGCGCTTGATGGATGGAAT 55731 Query 93316 TGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGAT 93375 ||| || ||||||| ||| | | || || ||| |||| ||||| ||||| || Sbjct 55732 TGTCTCAATAGCGTCAAACAAAAGAGTCCGGTCATCCAGGTCTCTGATGTAGGTATCAAT 55791 Query 93376 TAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACA 93435 | ||| || || | || || || || || || || || || || || |||||||| Sbjct 55792 GAGCAGGGAGTAGGTCTCTGAGTGTACGTTTTCTATCATGATCTGAAAACCATAGAAACA 55851 Query 93436 TCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTAT 93495 | || || | | ||| || || | ||||||| || ||||| ||||| || || || Sbjct 55852 ACGCGCCTCAGCCACCTGAACCTCGTTGGAAAATCGTTCAACGAGGTTTTCGTTAACGAT 55911 Query 93496 ACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTT 93555 ||||||||| || || ||||| |||| | |||| || |||| | || | || Sbjct 55912 ACCATCGGAGGCAGCGAAAAACGCCAGAACATGCGAAATGAAATATCGTTCGTTCGAGTT 55971 Query 93556 AAG---CTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAA 93612 || |||| ||| || || || | || || || | ||| || |||||||||| Sbjct 55972 GAGTTTGTTATTCCAGTCTATGAGGTCATGCGACAGGTCTATTTCCTCCGCAGTCCAAAA 56031 Query 93613 CGATGCTTCTGCTTTTTTGTACA 93635 ||||| | ||||| |||||||| Sbjct 56032 GGATGCCTGTGCTTGTTTGTACA 56054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857382266840