Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1 109 1e-18 seq53 91.5 3e-13 >seq1 Length=977895 Score = 109 bits (120), Expect = 1e-18 Identities = 148/204 (73%), Gaps = 3/204 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||||||| | || ||||| ||||| |||| |||| | || || | || || Sbjct 347732 GGCCCCAATGGTTCTGGCAAGTCGACCCTCGTCAAGCTCCTCATCGGTGACATGGAGCCC 347673 Query 280239 ACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || | |||||||| ||||| || || | |||||||| |||||| Sbjct 347672 AACAAGGGTGGTGAGACCTGGAAGCACCCCAATTTGGTTATCGGCTACGTCGCCCAGCAC 347613 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| |||||||| |||| ||||||| | | ||||| | |||||| Sbjct 347612 GCCTTCCACCACATCGACAACCACCTCGACAAGACTCCTCTCGAGTACATGCTGTGGCGT 347553 Query 280356 TATGCAAGTGGGCAGGATCTGGAG 280379 ||| | || ||||||||||| Sbjct 347552 TATCAGACCGGTGAGGATCTGGAG 347529 Score = 87.8 bits (96), Expect = 4e-12 Identities = 104/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 279706 TGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTGCGTGCCGATG 279765 |||| || ||||||||||||||||| ||||| |||||||||| || | || ||| Sbjct 348314 TGTCTGGAGGTTGGAAGATGAAGCTCGCCCTTGCTCGCGCCATGCTGTTCAAGGCTGATA 348255 Query 279766 TCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCCTGGCTAGTGT 279825 ||||||| || || ||||| || ||||| | || | |||||| |||||| | | | Sbjct 348254 TCCTACTCCTCGACGAGCCCACTAACCATCTTGATGTCGTCAACGTCGCCTGGTTGGAGA 348195 Query 279826 CCTACCTAACCAGTCTGAAGA 279846 ||| || |||| ||| |||| Sbjct 348194 GCTATCTGACCAATCTCAAGA 348174 >seq53 Length=257799 Score = 91.5 bits (100), Expect = 3e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 251562 TTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGT 251621 ||||||||| || | ||| |||| ||||| || | |||||||||||||| || ||||| Sbjct 58065 TTCGAAGAAGTTGGTCTTCCCCTGAAGAGAAATCATGTCCATGAAGTCGAACGGATTTGT 58006 Query 251622 GGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAG 251681 |||||| ||| || |||||||| || | | ||||| || || ||||| | Sbjct 58005 CTTATTGTAGACCTTCTCATTCCCAAGTGCAACTAGAAGTCGGTCGGCTACGAACTCAAT 57946 Query 251682 ATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 ||||| | ||||| |||| ||||||||||| Sbjct 57945 GTACTGGCACATCAAGTCAGCATTCATGCCAAT 57913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027830333942931