Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq86 136 9e-27 seq151 132 1e-25 seq53 84.2 5e-11 seq25 84.2 5e-11 >seq86 Length=184889 Score = 136 bits (150), Expect = 9e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||||| ||| || || |||||||| ||||||| ||| || || || ||||| | Sbjct 22845 CGAGATGAAGGGTGGACTCCTTCTGGATATTGTAGTCGGAGAGAGTACGACCATCTTCCA 22904 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 ||| || ||||| || ||||| || ||||| | ||||| || || || ||||||| Sbjct 22905 GTTGCTTACCTGCAAAAATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGGA 22964 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || || || || || | || ||| || |||||||| ||||| ||||||| Sbjct 22965 TCTTGGCCTTGACATTGTCGATGGTGTCCGACGACTCAACTTCGAGGGTGATGGTCTTCC 23024 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | ||||||||||| || || || ||||| Sbjct 23025 CTGTCAGAGTCTTAACAAAGATTTGCAT 23052 Score = 132 bits (146), Expect = 1e-25 Identities = 148/198 (75%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 288276 CGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCC 288335 ||| || || || |||||||| ||||||| ||| || || || || || | || || || Sbjct 22301 CGTACTCTCCTTCTGGATATTGTAGTCGGAGAGTGTCCGCCCATCCTCAAGCTGCTTGCC 22360 Query 288336 TGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTT 288395 || ||||||| ||||| || | ||||| ||||| || ||||| || ||||| || Sbjct 22361 AGCAAAGATCAACCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCCTGAATCTTCGCCTT 22420 Query 288396 CACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGT 288455 ||||| || || | |||| ||| || || ||||| || ||||||||||| || || || Sbjct 22421 GACGTTGTCAATCGTATCGGACGACTCAACCTCGAGGGTAATCGTCTTCCCCGTGAGCGT 22480 Query 288456 CTTGACGAATATCTGCAT 288473 |||||| || |||||||| Sbjct 22481 CTTGACAAAGATCTGCAT 22498 Score = 132 bits (146), Expect = 1e-25 Identities = 154/208 (74%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 288266 CGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTA 288325 ||||||| | ||| || || || || |||||||| | || |||||||||||||| | Sbjct 22568 CGAGATGGAGGGTGGACTCCTTCTGAATGTTATAGTCAGAAAGTGTGCGTCCGTCTTCAA 22627 Query 288326 ATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGA 288385 || || || || || |||||||| || || || || || ||||||||||||| Sbjct 22628 GCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCCGGCGGAATGCCCTCTTTATCCTGGA 22687 Query 288386 TTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCC 288445 | || || || ||||| || |||| ||| || || |||||||| ||||| ||||| | Sbjct 22688 TCTTGGCCTTGACGTTGTCGATAGTATCCGATGACTCGACTTCGAGGGTGATAGTCTTTC 22747 Query 288446 CGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || || ||||||||||| |||||||| Sbjct 22748 CTGTGAGCGTCTTGACGAAGATCTGCAT 22775 >seq151 Length=73757 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| || ||||| | ||| || ||||||| || || || || ||||| ||||||| Sbjct 41347 TCCTCCACGGAGACGAAGGACTAGATGAAGTGTCGACTCCTTCTGAATATTGTAGTCGGA 41406 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || || || ||||| | || || || |||||||| ||||| || || || Sbjct 41407 AAGAGTACGACCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGG 41466 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| ||||| || ||||| || || | || || || || |||| ||| ||| || || Sbjct 41467 GATGCCTTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTCGGACGACTCGAC 41526 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| |||||||||||||| ||||| || |||||||| |||||||| Sbjct 41527 CTCGAGAGTGATCGTCTTCCCTGTCAGGGTTTTGACGAAGATCTGCAT 41574 >seq53 Length=257799 Score = 84.2 bits (92), Expect = 5e-11 Identities = 123/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 || || |||||||| || | ||| || || || || ||||| || || || |||| Sbjct 57913 ATTGGCATGAATGCTGACTTGATGTGCCAGTACATTGAGTTCGTAGCCGACCGA--CTTC 57970 Query 269212 ACG--GCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAAC 269269 | ||||| || ||||||| || |||||| || ||||| |||| ||| ||||| Sbjct 57971 TAGTTGCACTTGGGAATGAGAAGGTCTACAATAAGACAAATCCGTTCGACTTCATGGACA 58030 Query 269270 TAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 | ||||| || | || ||||| |||||||||||||| || ||| ||||| Sbjct 58031 TGATTTCTCTTCAGGGGAAGACCAACTTCTTCGAAAAACGGGTCTCGGACTA 58082 >seq25 Length=364676 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| |||||||||||||| ||||| || || || || | || || || || || Sbjct 239269 CCTTCCTTATCCTGGATTTTGGCTTTGACATTGTCGATGGTGTCCGAAGACTCCACCTCA 239328 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || |||||||||||||| || || ||||||||||| || ||||| Sbjct 239329 AGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAGATTTGCAT 239372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646978867898