Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq86 100 2e-15 seq151 98.7 6e-15 seq61 87.8 1e-11 >seq86 Length=184889 Score = 100 bits (110), Expect = 2e-15 Identities = 116/154 (75%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||| |||||||| || |||||||| || |||||||| |||||||| || || ||||| Sbjct 22897 ATCTTCCAGTTGCTTACCTGCAAAAATCAGGCGTTGTTGGTCAGGAGGGATGCCCTCCTT 22956 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| |||||| || || || || | | | || || | ||||| | Sbjct 22957 GTCCTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGACGACTCAACTT-CGAGGGTGA 23015 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || ||||||||||| || ||||| Sbjct 23016 TGGTCTTCCCTGTCAGAGTCTTAACAAAGATTTG 23049 Score = 93.3 bits (102), Expect = 3e-13 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Plus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 |||||||| ||||| ||||||||||| |||||||| || || || ||||| || || || Sbjct 22621 TCTTCAAGCTGCTTGCCAGCAAAAATCAGACGTTGCTGGTCCGGCGGAATGCCCTCTTTA 22680 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAAT 480736 || || ||||| ||||| || |||||||| | || | | ||| ||||| || Sbjct 22681 TCCTGGATCTTGGCCTTGACGTTGTCGATAGTATCCGATGACTCGA-CTTCGAGGGTGAT 22739 Query 480737 AGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || ||||| ||||| ||||| || || Sbjct 22740 AGTCTTTCCTGTGAGCGTCTTGACGAAGATCTG 22772 >seq151 Length=73757 Score = 98.7 bits (108), Expect = 6e-15 Identities = 96/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||||||||| ||||| ||||| || ||||||||| | ||||| | | || || | Sbjct 41139 CAAGATGAAGGGTACTCTCTTTCTGAATATTATAATCCGAGAGAGTACGGCCGTCCTCGA 41198 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 | || || || || ||||| |||||||| || |||||||| || ||||||||||| || | Sbjct 41199 GCTGTTTGCCGGCGAAAATGAGACGTTGCTGGTCAGGAGGGATGCCTTCCTTGTCCTGGA 41258 Query 480685 TCTT 480688 |||| Sbjct 41259 TCTT 41262 Score = 95.1 bits (104), Expect = 8e-14 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || ||||||||||| || || || ||| || || | ||||| Sbjct 41353 ACGGAGACGAAGGACTAGATGAAGTGTCGACTCCTTCTGAATATTGTAGTCGGAAAGAGT 41412 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | |||||| || ||||| ||||| || || |||||||| || || ||||| || || Sbjct 41413 ACGACCATCTTCCAGCTGCTTGCCAGCGAAGATGAGACGTTGCTGGTCGGGAGGGATGCC 41472 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 ||||||||| |||||||| |||||| || ||||| || Sbjct 41473 TTCCTTGTCCTGAATCTTGGTCTTGACATTGTCGATAGTGTC 41514 >seq61 Length=235122 Score = 87.8 bits (96), Expect = 1e-11 Identities = 131/185 (71%), Gaps = 6/185 (3%) Strand=Plus/Minus Query 474737 GCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCG 474796 ||||| | ||||| || || ||||| ||||||||||| ||||||||||| || || || Sbjct 69303 GCAGTCGTCACTGTCCCCGCGTATTTCAATGATTCTCAGCGTCAAGCAACCAAGGACGCT 69244 Query 474797 GGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTT 474856 |||| || | || | || || | ||||| || ||||| || || || || || | Sbjct 69243 GGAACGATCTCCGGGATGAACATTCTCCGTATCATCAATGAGCCCACCGCCGCAGCTATC 69184 Query 474857 GCTTATGGTCTTGATAAGAA---TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGT 474913 || || ||||| |||||||| ||||| | || |||||| | ||||| || | Sbjct 69183 GCCTACGGTCTCGATAAGAAGGTTTCTGGC---GAGCGAAATGTCCTCATCTTCGACCTT 69127 Query 474914 GGAGG 474918 ||||| Sbjct 69126 GGAGG 69122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268158138627668