Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq53 109 7e-18 seq29 105 8e-17 seq76 93.3 5e-13 seq89 86.0 8e-11 >seq53 Length=257799 Score = 109 bits (120), Expect = 7e-18 Identities = 203/299 (68%), Gaps = 17/299 (6%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| || || || || || || | ||| || ||| | |||||| ||||| || | Sbjct 57722 TATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGGCCAGGCATAAGAC 57663 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 |||| || || | |||||| || | | ||| ||||||||||| ||||| || || | Sbjct 57662 CGCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAATATGCCTTCCACAG 57603 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTG-------ATC 869344 |||| ||| ||| ||| || |||||||| |||||| ||||| ||| Sbjct 57602 CGGCGAAGGCGACGAGACGTTCGGCAAA--CGTCGAG--------TGTTGGTCAGAAATC 57553 Query 869345 CACTTCATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAG 869404 ||| | | ||||| || ||||| ||| | | | || | || || |||||| ||| Sbjct 57552 CACCTGAGAGCCCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTCAAAC 57493 Query 869405 AGGTGGTCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || | ||| ||||| ||||||| || |||||||| ||||| ||||| ||||| Sbjct 57492 AGATATTCCCGCTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGTCTC 57434 Score = 98.7 bits (108), Expect = 1e-14 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 ||||| ||||||||||| |||| || || |||| ||||| | |||||| || | | Sbjct 58064 TCGAAGAAGTTGGTCTTCCCCTGAAGAGAAATCATGTCCATGAAGTCGAACGGATTTGTC 58005 Query 868778 GTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGATG 868837 | |||||| ||| || || || | | || || |||||||| || ||||| ||| Sbjct 58004 TTATTGTAGACCTTCTCATTCCCAAGTGCAACTAGAAGTCGGTCGGCTACGAACTCAATG 57945 Query 868838 TACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAG 868884 ||||||||||| | | | || |||||||| |||||| |||||| || Sbjct 57944 TACTGGCACATCAAGTCAGCATTCATGCCAATGAGCTTCACCGGTAG 57898 Score = 87.8 bits (96), Expect = 2e-11 Identities = 125/176 (71%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 || ||| |||||| || ||||| || || | | ||||||| ||||| | || Sbjct 55182 ACCCGCTTCTCGAAGAAATTGGTTTTCCCTTGCATGGAGATCATGTCCATGAAGTCAAAG 55241 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 ||||| | | |||| | ||||| ||||| ||| | || || ||||| || ||| Sbjct 55242 GGGTTTTGTGAGCCGTAGCGTTTTTCATTGCCGAGGGACACCAGGAGTCGGTCAGCAACA 55301 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAG 868884 || |||||||||||||||||||| | || ||||| |||||||| || || || || Sbjct 55302 AATTCGATGTACTGGCACATGAGCCTCGCATTCATACCGATGAGTGCTACTGGGAG 55357 >seq29 Length=391133 Score = 105 bits (116), Expect = 8e-17 Identities = 102/131 (78%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGC 19112 || ||||| |||||||||||||| |||||||| ||| | |||||||| || || | Sbjct 229231 ATTGGCGGAACGGTGACGTGCGTTATCCGCAACGTTCCGTCTGGCCTCGGAGAACCTGTC 229290 Query 19113 TTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGA 19172 ||||||||| |||| ||| ||| | ||||| |||||||| || || |||||||||| Sbjct 229291 TTTGACAAGTTCGAAGCCATGCTTGGGCACGCAATGCTGTCAATTCCCGCCACCAAGGCT 229350 Query 19173 TTCGAGATTGG 19183 ||||| || || Sbjct 229351 TTCGAAATCGG 229361 >seq76 Length=175981 Score = 93.3 bits (102), Expect = 5e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 1627870 TCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGGCGGGCC 1627929 |||||||| |||||||| |||| ||| || || ||||| || | ||||||| | || || Sbjct 105710 TCGGCGAGACCCTGCACACCGATGCCAATGGGACGGTGACGGAAGTTCGAGCGACGAGCT 105769 Query 1627930 TCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACGACCTGG 1627989 || || | || |||| |||||||||||| | |||||| || ||| | | ||||||| | Sbjct 105770 TCAGGAATGGGATAGTAGTTGATGTCGATAATGCGGTTCAGATTGAACGCAACGACCTTG 105829 Query 1627990 ACGATCTCGTGCAG 1628003 || ||||| || Sbjct 105830 GTGACATCGTGGAG 105843 >seq89 Length=163956 Score = 86.0 bits (94), Expect = 8e-11 Identities = 164/234 (70%), Gaps = 12/234 (5%) Strand=Plus/Plus Query 1852090 GAGGCCCGGCACGAGCGGGTTGAGCAGGTGGAAGCGCTTCCGATAGCCGAGGACCGGCAG 1852149 |||||| || || | | ||| | |||||| ||| || || ||||||||| ||| || Sbjct 86417 GAGGCCGGGGACCATGGCGTTCATGAGGTGGGCGCGTTTGCGGTAGCCGAGGCGCGGGAG 86476 Query 1852150 GTGG---TCGCGCGCAAAGGCAAATATCTTGCGCTGGTCG-CGCCCGCCAAACTGGGCGT 1852205 || | ||| ||||||| || || |||||||||||| ||||| || || ||| || Sbjct 86477 GTAGAGTTCG---GCAAAGGTGAAGATTTTGCGCTGGTCGACGCCC-CCGAATTGGAAGT 86532 Query 1852206 CGACGTCGAGGTGCTGCTCGTCGAGGGCCTGCATGAGC-GGGTAGAGCACGTTGCTCAGG 1852264 || |||||| || |||||||| ||||| | || | |||||||| | ||| || Sbjct 86533 CGCATCCGAGGTACTCTTCGTCGAGTGCCTGGA-GACCGGGGTAGAGGAGTCCGCTGAGC 86591 Query 1852265 AGCGGGTTGCGGTCCATCTTGACCACCTGAGCGGCGGCCTTTT--GCGCCGTGC 1852316 || ||| | | | |||||| || | ||| ||||||||| ||| ||||| Sbjct 86592 AGGGGGCTCTCGACTTGCTTGACGACTTCGGCGCCGGCCTTTTTGGCGTCGTGC 86645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107098906240647