Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq151 105 6e-18 seq86 96.9 3e-15 >seq151 Length=73757 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | ||||| || || || || || || || ||||| || || | || Sbjct 41574 ATGCAGATCTTCGTCAAAACCCTGACAGGGAAGACGATCACTCTCGAGGTCGAGTCGTCC 41515 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| ||||| || |||||||| || Sbjct 41514 GACACTATCGACAATGTCAAGACCAAGATTCAGGACAAGGAAGGCATCCCTCCCGACCAG 41455 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| || || || |||||||| ||| | | | || || || || Sbjct 41454 CAACGTCTCATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGTACTCTTTCCGACTACAAT 41395 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| |||||||| || Sbjct 41394 ATTCAGAAGGAGTCGACACTTCA 41372 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || || || || | || || || | || Sbjct 41346 ATGCAGATCTTCGTGAAGACGTTGACGGGCAAGACCATCACTTTGGAGGTGGAGTCTTCC 41287 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| ||||| || ||||| || || Sbjct 41286 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAG 41227 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | || || ||||| |||||||| ||||| | | | || |||||||| Sbjct 41226 CAACGTCTCATTTTCGCCGGCAAACAGCTCGAGGACGGCCGTACTCTCTCGGATTATAAT 41167 Query 24884 ATTCAAAAGGA 24894 ||||| || || Sbjct 41166 ATTCAGAAAGA 41156 >seq86 Length=184889 Score = 96.9 bits (106), Expect = 3e-15 Identities = 146/208 (70%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || ||||| || || || || ||||| ||||| || || | || Sbjct 22498 ATGCAGATCTTTGTCAAGACGCTCACGGGGAAGACGATTACCCTCGAGGTTGAGTCGTCC 22439 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || ||||| || ||||| ||||| || || || || || Sbjct 22438 GATACGATTGACAACGTCAAGGCGAAGATTCAGGACAAGGAAGGCATCCCCCCTGACCAG 22379 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||||||| || || ||||| |||||| | | | | || || || || Sbjct 22378 CAGCGGTTGATCTTTGCTGGCAAGCAGCTTGAGGATGGGCGGACACTCTCCGACTACAAT 22319 Query 24884 ATTCAAAAGGAATCGACACTACACTTGG 24911 || || ||||| || || ||||||| Sbjct 22318 ATCCAGAAGGAGAGTACGCTGCACTTGG 22291 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || ||||| || |||||||| || | | Sbjct 22775 ATGCAGATCTTCGTCAAGACGCTCACAGGAAAGACTATCACCCTCGAAGTCGAGTCATCG 22716 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| || ||||| || || || || || || Sbjct 22715 GATACTATCGACAACGTCAAGGCCAAGATCCAGGATAAAGAGGGCATTCCGCCGGACCAG 22656 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 |||||| |||| ||||| || || ||||| || || || ||| | || || ||||| Sbjct 22655 CAACGTCTGATTTTTGCTGGCAAGCAGCTTGAAGA-CGGACGCACACTTTCTGACTATAA 22597 Query 24883 CATTCAAAAGGAATCGACACTACA 24906 |||||| ||||| || || || || Sbjct 22596 CATTCAGAAGGAGTCCACCCTCCA 22573 Score = 91.5 bits (100), Expect = 1e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 24809 ATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAAC 24868 || |||||||| ||||||||| |||||||||| || || ||||| || || | | | Sbjct 23175 ATCCCTCCCGACCAACAACGTCTGATCTTTGCTGGCAAGCAGCTTGAAGACGGGCGCACA 23116 Query 24869 ATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGA 24928 |||| ||||||||||| || ||||| || || || ||| | ||| | || |||||||| Sbjct 23115 TTGTCGGATTATAACATCCAGAAGGAGTCTACGCTTCACCTCGTGCTCCGCTTGCGCGGC 23056 Query 24929 GGC 24931 ||| Sbjct 23055 GGC 23053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449894838753480