Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq53 194 1e-44 >seq53 Length=257799 Score = 194 bits (214), Expect = 1e-44 Identities = 382/565 (68%), Gaps = 14/565 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 ||||||| |||||||| |||||||||| || |||||||| || || ||| | || || Sbjct 56064 ATATGGCGGCTGTACAAACAAGCACAGGCATCCTTTTGGACTGCGGAGGAAATAGACCTG 56005 Query 43790 ACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAA-------GAAAAACATTTTAT 43842 | | ||| | | | |||| || | || | ||| ||| | |||| || Sbjct 56004 TCGCATGACCTCATAGACTGGA----ATAACAAACTCAACTCGAACGAACGATATTTCAT 55949 Query 43843 ATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAG 43902 || ||| |||||||||| ||||| ||| || || || || ||||| | ||| Sbjct 55948 TTCGCATGTTCTGGCGTTTTTCGCTGCCTCCGATGGTATCGTTAACGAAAACCTCGTTGA 55889 Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 || ||| | | || ||||| | | || || || ||||| ||||| ||||| || Sbjct 55888 ACGATTTTCCAACGAGGTTCAGGTGGCTGAGGCGCGTTGTTTCTATGGTTTTCAGATCAT 55829 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG 44022 |||||||| | || || || | ||| || || || ||||| ||||||| ||| Sbjct 55828 GATAGAAAACGTACACTCAGAGACCTACTCCCTGCTCATTGATACCTACATCAGAGACCT 55769 Query 44023 GCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGC 44082 | | || | || |||||| | || || || ||| | || | || || | ||||| Sbjct 55768 GGATGACCGGACTCTTTTGTTTGACGCTATTGAGACAATTCCATCCATCAAGCGCAAAGC 55709 Query 44083 AGACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGC 44139 || ||||| || | |||||| || | || |||| |||||||| ||||| Sbjct 55708 CGAGTGGGCTCTCAGGTGGATAGCGGACAAGCAATCAACGTTTGCGGAACGACTGGTCGC 55649 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 || || | ||| |||||||| || ||||| |||||||| || | ||||||||| | || Sbjct 55648 CTTCGCCGCTGTAGAAGGCATATTTTTTTCGGGATCGTTCGCCTCGATATTTTGGATGAA 55589 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 ||| || ||||| |||||||| | || ||||||||||| | || || || |||||||| Sbjct 55588 GAAGCGTGGTTTCATGCCTGGCCTCACATTTTCAAATGAACTTATTAGCCGGGATGAAGG 55529 Query 44260 CTTACATTGCGATTTTGCTTGCTTG 44284 | ||| || || ||||||||| Sbjct 55528 TCTTCATACGGACTTCGCTTGCTTG 55504 Score = 170 bits (188), Expect = 2e-37 Identities = 378/561 (67%), Gaps = 12/561 (2%) Strand=Plus/Plus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || ||||| ||||| || || || | || ||||| ||||||||||| ||| | || | Sbjct 57179 ATTTGGCAGATGTATAAGAAGGCCGAAGCTTCATTCTGGACAGCAGAGGAAATGGACCTC 57238 Query 43790 ACTAAAGA-CTTAGCAC-ATTGGA----TTGCATTAAAACCACAAGAAAAACATTTTATA 43843 | ||||| ||| ||| | |||| | || |||| || | || || || || Sbjct 57239 TCGAAAGATCTT--CACGACTGGAACAATCGCCTTAATGACA-ACGAGCGTCACTTCATC 57295 Query 43844 TCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGT 43903 ||| ||| | || || ||||| || || || |||||||| || || ||| | Sbjct 57296 TCTCATGTTCTCGCCTTCTTTGCCGCTTCGGATGGAATAGTCAACGAGAACTTGCTCGAG 57355 Query 43904 CGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCC 43963 || ||| | | ||||| || | | || || || |||||||| ||||| || ||| Sbjct 57356 CGTTTTTCCAATGAAGTCCAGGTCGCCGAGGCTCGGTGTTTTTACGGGTTCCAGATTATG 57415 Query 43964 ATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGGG 44023 || ||||| ||||| || || | ||| ||| || || || || |||||||| |||| Sbjct 57416 ATGGAAAACATTCACTCCGAGACGTATTCTCTCCTCATCGACACATACATCAAGGATGTT 57475 Query 44024 CACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCA 44083 |||| | | ||||| | || || ||||| | ||| || || | || || Sbjct 57476 GCCGAGCGGGAATATCTGTTTGACGCCATTGAAACCATCCCTTGCATCAAGAAGAAGGCG 57535 Query 44084 GACTGGGCCCTTAAATGGATAAATTCAAATGATTCT---TTTGGAGAACGACTTGTCGCG 44140 || ||||| || | ||||| | | | || |||| ||||| || ||||| Sbjct 57536 GAATGGGCTCTCAGGTGGATTTCTGACCAACACTCGACGTTTGCCGAACGTCTCGTCGCC 57595 Query 44141 TTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAG 44200 || || | |||||||||||| || || || |||||||| || | ||||||||| | || Sbjct 57596 TTCGCCGCTGTGGAAGGCATATTTTTCTCGGGATCGTTCGCCTCGATATTTTGGATGAAA 57655 Query 44201 AAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGC 44260 ||||| ||| | |||||||| | || ||||||||||| | || || |||||||| ||| Sbjct 57656 AAACGCGGTCTTATGCCTGGCCTCACATTTTCAAATGAACTTATTAGCCGTGATGAGGGC 57715 Query 44261 TTACATTGCGATTTTGCTTGC 44281 | ||| |||||| || ||| Sbjct 57716 ATGCATACCGATTTCGCATGC 57736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453621598455