Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq53 114 2e-20 seq76 104 3e-17 seq5 82.4 1e-10 >seq53 Length=257799 Score = 114 bits (126), Expect = 2e-20 Identities = 330/502 (66%), Gaps = 7/502 (1%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| ||| ||||||||||||||| || || || ||||| ||||| || || Sbjct 57714 CCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGGCCAGGCATAAGACCGCGTTTT 57655 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||| |||| | || | | ||| || || ||||| || || || |||||| || || Sbjct 57654 TTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAATATGCCTTCCACAGCGGCGAAG 57595 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTG-CATCAAACCATTTCATTGCCCATTT 122855 || | || |||||||| || | |||| || | || || ||| | | ||||||| Sbjct 57594 GCGACGAGACGTTCGGCAAACG-TCGAGTGTTGGTCAGAAATCCACCTGAGAGCCCATTC 57536 Query 122856 CGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCTTCTTTTCAGA 122915 ||||||||||| || || || | |||| ||||| ||||| | | | | || | Sbjct 57535 CGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTCAAACAGATATTCCCGCTCGGC 57476 Query 122916 TCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCATTT-CAT 122974 ||||||| |||||| |||| || | ||||| || ||| |||| ||| ||| Sbjct 57475 AACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGTCTCGGAGTGAATGTTTTCCAT 57416 Query 122975 TATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAAAAT 123034 || | || | |||| || | || || ||| | ||| || |||| | |||| Sbjct 57415 CATAATCTGGA-ACCCGTAAAAACACCGAGCCTCGGCGACCTGGACTTCATTGGAAAAAC 57357 Query 123035 TGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGTACT 123094 | | ||||| || |||||||| || | |||||||| || || | | Sbjct 57356 GCTCGAGCAAGTTCTCGTTGACTATTCCATCCGAAGCGGCAAAGAAGGCGAGAACATGAG 57297 Query 123095 TTATGAATTTCTTTTCATTTTCATTCAGG---GTCTTCCAGTCGTCAAGATCTTTGGACA 123151 ||||| | || || ||||| ||| | |||||||||| ||||||||| || | Sbjct 57296 AGATGAAGTGACGCTCGTTGTCATTAAGGCGATTGTTCCAGTCGTGAAGATCTTTCGAGA 57237 Query 123152 AATCAACTTCTTCCGCAGTCCA 123173 || | ||| || || ||||| Sbjct 57236 GGTCCATTTCCTCTGCTGTCCA 57215 >seq76 Length=175981 Score = 104 bits (114), Expect = 3e-17 Identities = 159/225 (71%), Gaps = 5/225 (2%) Strand=Plus/Plus Query 111572 AAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCT 111631 || || ||||||||||| |||| | || ||||| || || ||||||| | || Sbjct 106323 AAGAGATCTGGAATCCAAAGGGCGTAGAAAAGATCCCTCGCGCGCACCTCTTCCTTTCCA 106382 Query 111632 TGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACT 111691 ||||| | || || | ||| || | || ||| || ||||||||||||| ||||| Sbjct 106383 TGGTTCTTCCTCAAATCCAAGAATTCGAAGACATCAGCATGCCATGGCTCAATATAGATG 106442 Query 111692 GCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAA 111747 |||| || || | || | | ||| |||||| |||||||| || ||||||| | | Sbjct 106443 GCGAAAGCGCCGGGGCGTTTGTTG-CCACCTTGATCGACATAGCGAGCAGTGGCGTCATA 106501 Query 111748 TACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCC 111792 | |||||||||| || | ||| |||| ||| | |||||| || || Sbjct 106502 TGCGCGAAGCATCGGCACAATGCCATTTGAGTAACCATTGGTTCC 106546 Score = 87.8 bits (96), Expect = 2e-12 Identities = 138/193 (72%), Gaps = 6/193 (3%) Strand=Plus/Plus Query 111885 CATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC--ATCTG 111942 ||||||| || | || ||||| ||||| || || | |||||| || || | || Sbjct 106695 CATAGATGCCCTCAATAGAGTCGTCCTTCATGCAGACCAAGAAGCA--TGAACTAAGTTG 106752 Query 111943 CGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATA-CCTTGGG 112001 || |||||||||||||||||||||||| || | |||||| |||| ||| | || || Sbjct 106753 TGGATGTGGTGTACCAGCATTGAAGAGGGTAGGCGATGCGTGCGTGAA-ATAGCGTTCGG 106811 Query 112002 ACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGA 112061 |||| || || || || | |||| || |||||| || || ||||||| |||| Sbjct 106812 ACATGAGGTTATAAGTTTCAATGACACGGTCGATGTCTGAACCATGAATGCCGACGGCGA 106871 Query 112062 CCCGCATGAACAT 112074 | ||||||| ||| Sbjct 106872 CACGCATGATCAT 106884 >seq5 Length=764148 Score = 82.4 bits (90), Expect = 1e-10 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 9156 CGCATCTATCAAGCCTCTTCCTCAGAGATGTTTGGTAAGGTTAAGGAGTCACCACAAAAC 9215 ||| |||| || ||||| | || ||| ||| || ||||| ||| | || || | | Sbjct 412436 CGCTTCTACCAGGCCTCCACGTCCGAGTTGTACGGCAAGGTCGTAGAGACGCCGCAGAGC 412377 Query 9216 GAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCGGCACATTGG 9275 ||| ||| || |||||||||||||| |||||| | | || | ||| ||||| Sbjct 412376 GAGACGACGCCGTTCTACCCACGCTCACCCTACGGCTGCGCGAAACTCTACGCATATTGG 412317 Query 9276 CTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATCCTCTTCAAC 9335 | ||| || ||||||||||| ||||| |||| |||||| ||| || | |||||| Sbjct 412316 ATTGTCGTTAACTACCGCGAGTCGTACGGCATGTTCGCGTGCAACGGCATTTTGTTCAAC 412257 Query 9336 CATGA 9340 || || Sbjct 412256 CACGA 412252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628028145453600