Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq76 122 1e-22 seq5 91.5 2e-13 >seq76 Length=175981 Score = 122 bits (134), Expect = 1e-22 Identities = 163/225 (72%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 104513 GGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCG 104572 || || |||||| | ||| |||| ||| | || |||||||||| || | ||||||| || Sbjct 106546 GGAACCAATGGTTACTCAAATGGCATTGTGCCGATGCTTCGCGCATATGACGCCACTGCT 106487 Query 104573 CGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCC 104628 |||||||| |||||| ||| | | || | || || |||| ||||| ||||||| Sbjct 106486 CGCTATGTCGATCAAGGTGG-CAACAAACGCCCCGGCGCTTTCGCCATCTATATTGAGCC 106428 Query 104629 ATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGC 104688 |||||| || ||| || | || ||| | || ||| | ||||| || | || |||| Sbjct 106427 ATGGCATGCTGATGTCTTCGAATTCTTGGATTTGAGGAAGAACCATGGAAAGGAAGAGGT 106368 Query 104689 GCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTT 104733 ||| | ||||| |||| ||| || ||||||||||||||||| Sbjct 106367 GCGCGCGAGGGATCTTTTCTACGCCCTTTGGATTCCAGATCTCTT 106323 Score = 96.9 bits (106), Expect = 4e-15 Identities = 140/193 (73%), Gaps = 6/193 (3%) Strand=Plus/Minus Query 104231 ATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTCTTGGAGACA 104290 ||| ||||||| || ||| |||| |||||||| |||||| || |||| | || || Sbjct 106884 ATGATCATGCGTGTCGCCGTCGGCATTCATGGTTCAGACATCGACCGTGTCATTGAAACT 106825 Query 104291 TACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGG 104349 || || |||||| || | ||| |||| |||||| | || ||||||||||||||||| Sbjct 106824 TATAACCTCATGTCCGAACGCTAT-TTCACGCACGCATCGCCTACCCTCTTCAATGCTGG 106766 Query 104350 TACACCAAGACCCCAAAT--GTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATC 104407 ||||||| || ||| | || || |||||| | || || ||||| ||||| || Sbjct 106765 TACACCACATCCACAACTTAGTTCA--TGCTTCTTGGTCTGCATGAAGGACGACTCTATT 106708 Query 104408 AACGGTATCTATG 104420 | || ||||||| Sbjct 106707 GAGGGCATCTATG 106695 Score = 93.3 bits (102), Expect = 5e-14 Identities = 403/628 (64%), Gaps = 22/628 (4%) Strand=Plus/Minus Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATT- 105024 || ||||||||||||||| |||||| || || || || ||||||||| | |||| Sbjct 105990 AACCAAAAGAATTTGGGTACCATCAAGTCGTCGAACCTTTGCACAGAAATCATTGAATAC 105931 Query 105025 --TACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 105082 | || | |||| || ||||| || || ||||| || | |||||||| || Sbjct 105930 TCTTCACCCGAAGAA---ACCGCTGTTTGCAATCTCGCCTCGTTGGCTCTCCC----TAC 105878 Query 105083 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTC 105142 | ||| | |||| | | | |||| | ||||||||||| || || || || Sbjct 105877 CTTCATCAA-AGACGGCGTC-TACGATTTCCAGAAACTCCACGATGTCACCAAGGTCGTT 105820 Query 105143 ACCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAA 105202 | || || ||| | |||| || | || | || ||| || |||||| Sbjct 105819 GCGTTCAATCTGAACCGCATTATCGACATCAACTACTATCCCATTCCTGAAGCTCGTCGC 105760 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT- 105261 || || | | |||||||| ||||| ||||||| ||||||||||| ||| || || Sbjct 105759 TCGAACTTCCGTCACCGTCCCATTGGCATCGGTGTGCAGGGTCTCGCCGATACTTTTATG 105700 Query 105262 --TCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 |||| | | |||| || |||| | || ||||| | || | ||||| Sbjct 105699 GCTCTTCATATGC---CATTCGACTCCGTTGCCGCTAAGGAGCTTAACATTCAGATATTC 105643 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAGAGGTTGATGGTCCA 105379 |||||||| || |||| ||||||||||| || | ||| |||| ||| || ||| | Sbjct 105642 GAGACCATCTACCACGGTGCTCTTGAGGCCAGCGCTGAGATGGCTGAGAAGGAAGGTACC 105583 Query 105380 TATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAA 105439 || || || | | ||| ||| ||||| || || ||| || || || | | |||| Sbjct 105582 TACGAGACTTGGGCTGGTAGTCCCGCTTCCCAGGGACAGCTGCAGTTCGACCTCT-GGAA 105524 Query 105440 GGTGAGACCAAGCTTCACTA--CGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGG 105497 |||| |||| || |||| || ||| | | || |||||| ||| | | | Sbjct 105523 CGTGACGCCAA-CTGGACTATGGGATTGGTCATCGCTGAAGGAAAAGATCGCGCGCACTG 105465 Query 105498 GTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGG 105557 | || | || ||||| | ||||| ||||| || || || || |||||| ||| Sbjct 105464 GCCTCAGAAATTCGCTCCTTACCGCTCCTATGCCTACCGCATCGACGAGTCAAATCCTGG 105405 Query 105558 GTAATAATGAATGCTTTGAACCCTACAC 105585 | || |||||||| ||||| || || Sbjct 105404 GCTTCAACGAATGCTTCGAACCTTATAC 105377 >seq5 Length=764148 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/194 (71%), Gaps = 3/194 (2%) Strand=Plus/Minus Query 7226 AAGTAT---CGCGTATACCAAGCCTCAACTTCGGAGATGTTTGGTAAAGTCCGAGAAACT 7282 |||||| ||| | ||||| ||||| || || ||| ||| || || ||| ||| || Sbjct 412445 AAGTATGTACGCTTCTACCAGGCCTCCACGTCCGAGTTGTACGGCAAGGTCGTAGAGACG 412386 Query 7283 CCACAAAACGAGGAGACACCCTTCTACCCACGCTCGGTCTACGGAGTCTCAAAGGTTGCG 7342 || || | |||| ||| || |||||||||||||| |||||| | | || | Sbjct 412385 CCGCAGAGCGAGACGACGCCGTTCTACCCACGCTCACCCTACGGCTGCGCGAAACTCTAC 412326 Query 7343 GCACATTGGCTCGTCAAAAATTACCGCGAGTCTTACGGACTGTTTGCGTGCTCCGGAATC 7402 ||| ||||| | ||| || ||||||||||| ||||| |||| |||||| ||| || Sbjct 412325 GCATATTGGATTGTCGTTAACTACCGCGAGTCGTACGGCATGTTCGCGTGCAACGGCATT 412266 Query 7403 CTCTTCAACCATGA 7416 | |||||||| || Sbjct 412265 TTGTTCAACCACGA 412252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257220236840