Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lyophyllum_20decastes_20[genbank_20GCA_5F001950495.1_202016-12-09] 491 sequences; 43,035,370 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq53 127 2e-24 seq5 84.2 2e-11 >seq53 Length=257799 Score = 127 bits (140), Expect = 2e-24 Identities = 336/510 (66%), Gaps = 6/510 (1%) Strand=Plus/Minus Query 74762 ATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCC 74821 |||| ||| ||||| | ||| || | |||||| ||||| | |||||||||||||| || Sbjct 57721 ATGCATGCCCTCATCACGGCTAATAAGTTCATTTGAAAATGTGAGGCCAGGCATAAGACC 57662 Query 74822 ACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACA 74881 || || |||| |||||| || | ||| || || ||| || |||||||| ||| Sbjct 57661 GCGTTTTTTCATCCAAAATATCGAGGCGAACGATCCCGAGAAAAATATGCCTTCCACAGC 57602 Query 74882 CGCAAAGGCGACAAGGCGTTGCGCGAACG--GTGCATCGG-AAGTCATCCAAGTCTGAGC 74938 || |||||||| || |||| || |||| | | | || || ||||| | |||| Sbjct 57601 GGCGAAGGCGACGAGACGTTCGGCAAACGTCGAGTGTTGGTCAGAAATCCACCTGAGAGC 57542 Query 74939 CCATTCAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTT 74998 |||||| || || |||| ||||| || || || || | || || | || Sbjct 57541 CCATTCCGCCTTCTTCTTGATGCAAGGGATGGTTTCAATGGCGTCAAACAGATATTCCCG 57482 Query 74999 CTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGA 75058 ||| | |||||||| | |||| || | || || |||||||| || ||||| Sbjct 57481 CTCGGCAACATCCTTGATGTATGTGTCGATGAGGAGAGAATACGTCTCGGAGTGAATGTT 57422 Query 75059 CTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGA 75118 || | | |||| || |||| ||| |||| ||||| || | ||| || || || || Sbjct 57421 TTCCATCATAATCTGGAACCCGTAAAAACACCGAGCCTCGGCGACCTGGACTTCATTGGA 57362 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 |||| | | | ||||| |||| || || ||||| ||||| || || || || || Sbjct 57361 AAAACGCTCGAGCAAGTTCTCGTTGACTATTCCATCCGAAGCGGCAAAGAAGGCGAGAAC 57302 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGT---GAGTTTGTCCCAATCCTTCAGGTCCCC 75235 ||| ||||| ||||| | |||| | | | |||| ||| || | || || Sbjct 57301 ATGAGAGATGAAGTGACGCTCGTTGTCATTAAGGCGATTGTTCCAGTCGTGAAGATCTTT 57242 Query 75236 CGCCAAATCAATCTCCTCGACCGTCCAGAA 75265 || | || || ||||| | |||||||| Sbjct 57241 CGAGAGGTCCATTTCCTCTGCTGTCCAGAA 57212 Score = 109 bits (120), Expect = 6e-19 Identities = 278/417 (67%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 74769 CCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTC 74828 |||||||| | ||| || | |||||| ||||| | ||||||||||| | ||||||||| Sbjct 55529 CCTTCATCCCGGCTAATAAGTTCATTTGAAAATGTGAGGCCAGGCATGAAACCACGCTTC 55588 Query 74829 TTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAG 74888 |||| |||||| || | ||| || || || || |||||||| ||| || ||| Sbjct 55589 TTCATCCAAAATATCGAGGCGAACGATCCCGAAAAAAATATGCCTTCTACAGCGGCGAAG 55648 Query 74889 GCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATTC 74944 ||||| || |||| ||| |||| || || | ||| ||||| | ||||||| || Sbjct 55649 GCGACCAGTCGTTCCGCAAACGTTG-ATTGCTTGTCCGCTATCCACCTGAGAGCCCACTC 55707 Query 74945 AGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTC 75004 ||||| || |||| | || | || || || || | || | | | || || Sbjct 55708 GGCTTTGCGCTTGATGGATGGAATTGTCTCAATAGCGTCAAACAAAAGAGTCCGGTCATC 55767 Query 75005 GGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTT 75064 | || ||| | | ||||| | || ||||| ||||| || || | || | | Sbjct 55768 CAGGTCTCTGATGTAGGTATCAATGAGCAGGGAGTAGGTCTCTGAGTGTA-CGTTTTCTA 55826 Query 75065 GAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA-- 75121 | || ||| | | |||||| | |||||||| || | ||| || || || ||||| Sbjct 55827 TCATGATCTGAAAACCATAGAAACAACGCGCCTCAGCCACCTGAACCTCGTTGGAAAATC 55886 Query 75122 ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 |||| ||| || || | ||||| || || ||||| |||||||| ||||| || Sbjct 55887 GTTCA--ACGAGGTTTTCGTTAACGATACCATCGGAGGCAGCGAAAAACGCCAGAAC 55941 >seq5 Length=764148 Score = 84.2 bits (92), Expect = 2e-11 Identities = 119/162 (73%), Gaps = 8/162 (5%) Strand=Plus/Plus Query 124674 ATCTTGCGCGTCACAAACTCGGAACCGCGTCG-CTCAGACTC--GTGGTTGAACAGAATG 124730 |||||||||||||| || || | || ||| | | | ||| ||||||||||| |||| Sbjct 412213 ATCTTGCGCGTCACGAA---GGTCCTGCCTCGGCGCGGGCTCTCGTGGTTGAACAAAATG 412269 Query 124731 CCAGTACACGCAAACATCCCGTACGACTCGCGGTAGTTTTTCGTC-ATCCAATACCCAAA 124789 || | ||||| ||||| |||||||||||||||||| || || | |||||||| | | Sbjct 412270 CCGTTGCACGCGAACATGCCGTACGACTCGCGGTAG-TTAACGACAATCCAATATGCGTA 412328 Query 124790 GAGCTTGGACACGCCATAGGGGCTTCGGGGGTAGAATGGGGT 124831 ||| || | ||| ||||| || |||||||| || || Sbjct 412329 GAGTTTCGCGCAGCCGTAGGGTGAGCGTGGGTAGAACGGCGT 412370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547212641461800